RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TESCQ96BS2 214 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 TMEM56Q96MV1 263 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 VAT1Q99536 393 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 PDCD1LG2Q9BQ51 273 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 TMEM208Q9BTX3 173 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 C1orf50Q9BV19 199 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 DDA1Q9BW61 102 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 MS4A8Q9BY19 250 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 DSN1Q9H410 356 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 LINC00574Q9H8X3 128 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 PARVBQ9HBI1 364 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 DDIT4Q9NX09 232 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 ANXA10Q9UJ72 324 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 TMEM131Q92545 1883 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 IGHV3OR16-8A0A075B7F1 116 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 CNMDO75829 334 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 CNIH1O95406 144 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 KRT75O95678 551 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 SNAP29O95721 258 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 CD8AP01732 235 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 CRHP06850 196 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 PVALBP20472 110 aaPredicted RBP3.01□□□□□ -1.93
CCDC50-203ENST00000460064 ACOT2P49753 483 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 OR12D2P58182 307 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 KRTAP10-8P60410 259 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 RAB8AP61006 207 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 CD164Q04900 197 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 ATP5G2Q06055 141 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 SMCO1Q147U7 214 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 TRAM1Q15629 374 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 NDUFA5Q16718 116 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 PRR9Q5T870 116 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 TRIQKQ629K1 86 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 TMEM42Q69YG0 159 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 TMEM35BQ8NCS4 154 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 KLF14Q8TD94 323 aaPredicted RBP3.01□□□□□ -1.93
CCDC50-203ENST00000460064 MAFIPQ8WZ33 124 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 RILPQ96NA2 401 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 APOL4Q9BPW4 351 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 SLC19A3Q9BZV2 496 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 PRORYQ9H606 182 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 ALG5Q9Y673 324 aa3.01□□□□□ -1.93
CCDC50-203ENST00000460064 MTUS2Q5JR59 1369 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 ABCC11Q96J66 1382 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 KIAA1671Q9BY89 1806 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 ZNF532Q9HCE3 1301 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 A0A1B0GV72 72 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 EFCAB10A6NFE3 127 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 EFCAB9A8MZ26 197 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 KCNK1O00180 336 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 SYNGR1O43759 233 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 SSNA1O43805 119 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 IGLV3-19P01714 112 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 TFPTP0C1Z6 253 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 ELK4P28324 431 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 ADORA1P30542 326 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 TGFBR1P36897 503 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 RBX1P62877 108 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 RPL19P84098 196 aaKnown RBP3□□□□□ -1.93
CCDC50-203ENST00000460064 FLI1Q01543 452 aaPredicted RBP3□□□□□ -1.93
CCDC50-203ENST00000460064 C4orf26Q17RF5 130 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 CCDC58Q4VC31 144 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 FAM131AQ6UXB0 335 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 CLEC19AQ6UXS0 136 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 FAM19A5Q7Z5A7 132 aaPredicted RBP3□□□□□ -1.93
CCDC50-203ENST00000460064 TMED4Q7Z7H5 227 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 DPPA2Q7Z7J5 298 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 CPNE9Q8IYJ1 553 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 NATD1Q8N6N6 113 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 GPR32P1Q8NGA4 272 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 FAM57AQ8TBR7 257 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 HAVCR2Q8TDQ0 301 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 DOK4Q8TEW6 326 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 CASTOR1Q8WTX7 329 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 SPACA5Q96QH8 159 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 OR2V2Q96R30 315 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 METTL17Q9H7H0 456 aaPredicted RBP3□□□□□ -1.93
CCDC50-203ENST00000460064 RHOFQ9HBH0 211 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 PARP11Q9NR21 331 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 RBM22Q9NW64 420 aaKnown RBP eCLIP3□□□□□ -1.93
CCDC50-203ENST00000460064 ZNF391Q9UJN7 358 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 SNAPC4Q5SXM2 1469 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 PCF11O94913 1555 aaKnown RBP3□□□□□ -1.93
CCDC50-203ENST00000460064 NUP155O75694 1391 aa3□□□□□ -1.93
CCDC50-203ENST00000460064 TGIF2-C20orf24A0A0A6YYL0 155 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 C16orf90A8MZG2 172 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 UBDO15205 165 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 ENTPD6O75354 484 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 IFNA21P01568 189 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 IGKV1-17P01599 117 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 RLN2P04090 185 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 CST2P09228 141 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 SEC11BP0C7V7 166 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 IFNGR2P38484 337 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 SLCO1A2P46721 670 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 GABRA4P48169 554 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 DLX6P56179 175 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 PSPHP78330 225 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 MAPK14Q16539 360 aa2.99□□□□□ -1.93
CCDC50-203ENST00000460064 TBPL2Q6SJ96 375 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms