RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 TPBGQ13641 420 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 OR10K2Q6IF99 312 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 TRAT1Q6PIZ9 186 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 OR52M1Q8NGK5 317 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 CFHR4Q92496 578 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 NEDD4LQ96PU5 975 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 TMEM59Q9BXS4 323 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 RAB26Q9ULW5 256 aa12.98□□□□□ -0.33
CPSF6-203ENST00000456847 C12orf77C9JDV5 145 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 HSD17B6O14756 317 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 CA11O75493 328 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 SC5DO75845 299 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 CPEP16870 476 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 IL3RAP26951 378 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 ABCA11PQ4W5N1 156 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 FBLN7Q53RD9 439 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 C9orf152Q5JTZ5 239 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 C1orf100Q5SVJ3 147 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 OR8H3Q8N146 312 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 DRAM1Q8N682 238 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 MGLLQ99685 303 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 KCNK15Q9H427 330 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 PLGRKTQ9HBL7 147 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 GNG12Q9UBI6 72 aa12.97□□□□□ -0.33
CPSF6-203ENST00000456847 A0A1W2PPI3 338 aa12.96□□□□□ -0.33
CPSF6-203ENST00000456847 ARL6IP5O75915 188 aa12.96□□□□□ -0.33
CPSF6-203ENST00000456847 GLAP06280 429 aa12.96□□□□□ -0.33
CPSF6-203ENST00000456847 VSIG8P0DPA2 414 aa12.96□□□□□ -0.33
CPSF6-203ENST00000456847 CD28P10747 220 aa12.96□□□□□ -0.33
CPSF6-203ENST00000456847 DIAPH2-AS1Q14236 149 aa12.96□□□□□ -0.33
CPSF6-203ENST00000456847 NSUN5P1Q3KNT7 163 aa12.96□□□□□ -0.33
CPSF6-203ENST00000456847 SIGIRRQ6IA17 410 aa12.96□□□□□ -0.33
CPSF6-203ENST00000456847 LYG1Q8N1E2 194 aa12.96□□□□□ -0.33
CPSF6-203ENST00000456847 OR6M1Q8NGM8 313 aa12.96□□□□□ -0.33
CPSF6-203ENST00000456847 KCNIP1Q9NZI2 227 aa12.96□□□□□ -0.33
CPSF6-203ENST00000456847 MOB4Q9Y3A3 225 aa12.96□□□□□ -0.33
CPSF6-203ENST00000456847 M0QZK8 103 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 CCRL2O00421 344 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 HBZP02008 142 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 LPLP06858 475 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 TMEM11P17152 192 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 REG1BP48304 166 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 TBCEQ15813 527 aaPredicted RBP12.96□□□□□ -0.34
CPSF6-203ENST00000456847 TMEM30BQ3MIR4 351 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 TMEM91Q6ZNR0 172 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 ZNF367Q7RTV3 350 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 MOB3BQ86TA1 216 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 OR10V1Q8NGI7 309 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 OR1L1Q8NH94 360 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 KCNG3Q8TAE7 436 aa12.96□□□□□ -0.34
CPSF6-203ENST00000456847 SH2D7A6NKC9 451 aaPredicted RBP12.95□□□□□ -0.34
CPSF6-203ENST00000456847 SLC22A1O15245 554 aa12.95□□□□□ -0.34
CPSF6-203ENST00000456847 BPNT1O95861 308 aa12.95□□□□□ -0.34
CPSF6-203ENST00000456847 GAPDHP04406 335 aaKnown RBP12.95□□□□□ -0.34
CPSF6-203ENST00000456847 RPS27AP62979 156 aaKnown RBP12.95□□□□□ -0.34
CPSF6-203ENST00000456847 P2RY14Q15391 338 aa12.95□□□□□ -0.34
CPSF6-203ENST00000456847 FAM53AQ6NSI3 398 aaPredicted RBP12.95□□□□□ -0.34
CPSF6-203ENST00000456847 THNSL2Q86YJ6 484 aa12.95□□□□□ -0.34
CPSF6-203ENST00000456847 WNT10AQ9GZT5 417 aa12.95□□□□□ -0.34
CPSF6-203ENST00000456847 AK6Q9Y3D8 172 aaKnown RBP12.95□□□□□ -0.34
CPSF6-203ENST00000456847 TRRAPQ9Y4A5 3859 aa12.95□□□□□ -0.34
CPSF6-203ENST00000456847 IGKV1D-33P01593 117 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 IGKV1-33P01594 117 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 RCC1P18754 421 aaPredicted RBP12.94□□□□□ -0.34
CPSF6-203ENST00000456847 CALRP27797 417 aaKnown RBP12.94□□□□□ -0.34
CPSF6-203ENST00000456847 CHATP28329 748 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 LOXL3P58215 753 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 ZNF816Q0VGE8 651 aaPredicted RBP12.94□□□□□ -0.34
CPSF6-203ENST00000456847 GAPTQ8N292 157 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 LINC00311Q8N616 119 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 CYYR1Q96J86 154 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 OCSTAMPQ9BR26 566 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 TAF9BQ9HBM6 251 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 WNK1Q9H4A3 2382 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 FABP5Q01469 135 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 UNC119Q13432 240 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 HNF4GQ14541 408 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 RAB11BQ15907 218 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 Q3ZCU0 254 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 C8orf31Q8N9H6 132 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 MRPL30Q8TCC3 161 aaKnown RBP12.94□□□□□ -0.34
CPSF6-203ENST00000456847 SULT4A1Q9BR01 284 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 NICN1Q9BSH3 213 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 Q9H521 79 aa12.94□□□□□ -0.34
CPSF6-203ENST00000456847 CHMP1AQ9HD42 196 aaPredicted RBP12.94□□□□□ -0.34
CPSF6-203ENST00000456847 IGHV3-72A0A0B4J1Y9 119 aa12.93□□□□□ -0.34
CPSF6-203ENST00000456847 IGHV1-3A0A0C4DH29 117 aa12.93□□□□□ -0.34
CPSF6-203ENST00000456847 FAM90A9PA6NNJ1 464 aa12.93□□□□□ -0.34
CPSF6-203ENST00000456847 SLC31A2O15432 143 aa12.93□□□□□ -0.34
CPSF6-203ENST00000456847 DEFA6Q01524 100 aa12.93□□□□□ -0.34
CPSF6-203ENST00000456847 C6orf201Q7Z4U5 140 aa12.93□□□□□ -0.34
CPSF6-203ENST00000456847 CENPVQ7Z7K6 275 aaPredicted RBP12.93□□□□□ -0.34
CPSF6-203ENST00000456847 CITED2Q99967 270 aaPredicted RBP12.93□□□□□ -0.34
CPSF6-203ENST00000456847 URM1Q9BTM9 101 aaKnown RBP12.93□□□□□ -0.34
CPSF6-203ENST00000456847 TM2D1Q9BX74 207 aa12.93□□□□□ -0.34
CPSF6-203ENST00000456847 ACOT13Q9NPJ3 140 aa12.93□□□□□ -0.34
CPSF6-203ENST00000456847 PKD1L1Q8TDX9 2849 aa12.92□□□□□ -0.34
CPSF6-203ENST00000456847 TMEM14DPA8MWL7 114 aa12.92□□□□□ -0.34
CPSF6-203ENST00000456847 SLC17A2O00624 439 aa12.92□□□□□ -0.34
CPSF6-203ENST00000456847 ARSBP15848 533 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms