RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 ZFAND2BQ8WV99 257 aa11.91□□□□□ -0.5
CLCN1-203ENST00000455478 TMEM158Q8WZ71 300 aa11.91□□□□□ -0.5
CLCN1-203ENST00000455478 LEAP2Q969E1 77 aa11.91□□□□□ -0.5
CLCN1-203ENST00000455478 RAB3CQ96E17 227 aa11.91□□□□□ -0.5
CLCN1-203ENST00000455478 MALSU1Q96EH3 234 aa11.91□□□□□ -0.5
CLCN1-203ENST00000455478 HDHD3Q9BSH5 251 aaPredicted RBP11.91□□□□□ -0.5
CLCN1-203ENST00000455478 ATG5Q9H1Y0 275 aa11.91□□□□□ -0.5
CLCN1-203ENST00000455478 TAF9BQ9HBM6 251 aa11.91□□□□□ -0.5
CLCN1-203ENST00000455478 TRBV6-6A0A0A6YYG2 114 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 TMEM127O75204 238 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 IGHV3-7P01780 117 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 IGHV4-59P01825 116 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 HBZP02008 142 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 SERPINB10P48595 397 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 SCAND1P57086 179 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 MINOS1Q5TGZ0 78 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 TRAT1Q6PIZ9 186 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 ZNF554Q86TJ5 538 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 CROCCP3Q8IVE0 287 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 TMEM86BQ8N661 226 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 OR52M1Q8NGK5 317 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 OR1L1Q8NH94 360 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 FAM216AQ8WUB2 273 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 SSMEM1Q8WWF3 244 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 RIMS4Q9H426 269 aaPredicted RBP11.9□□□□□ -0.5
CLCN1-203ENST00000455478 TNFRSF19Q9NS68 423 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 PSG11Q9UQ72 335 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 POMT1Q9Y6A1 747 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 MINOS1-NBL1R4GNA1 71 aa11.9□□□□□ -0.5
CLCN1-203ENST00000455478 RNF212BA8MTL3 300 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 J3QR06 171 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 SDCBPO00560 298 aaPredicted RBP11.89□□□□□ -0.51
CLCN1-203ENST00000455478 MFNGO00587 321 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 SPINT2O43291 252 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 RNASE1P07998 156 aaKnown RBP11.89□□□□□ -0.51
CLCN1-203ENST00000455478 HIST1H1DP16402 221 aaKnown RBP11.89□□□□□ -0.51
CLCN1-203ENST00000455478 HTR1DP28221 377 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 RPL5P46777 297 aaKnown RBP11.89□□□□□ -0.51
CLCN1-203ENST00000455478 PRRX1P54821 245 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 SSX2Q16385 188 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.89□□□□□ -0.51
CLCN1-203ENST00000455478 OR9G1Q8NH87 305 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 ZNF596Q8TC21 504 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 SLC25A46Q96AG3 418 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 SLC25A38Q96DW6 304 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 CHIAQ9BZP6 476 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 ZMAT3Q9HA38 289 aaKnown RBP11.89□□□□□ -0.51
CLCN1-203ENST00000455478 CHMP1AQ9HD42 196 aaPredicted RBP11.89□□□□□ -0.51
CLCN1-203ENST00000455478 RHBDL2Q9NX52 303 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 GFOD1Q9NXC2 390 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 KCNIP1Q9NZI2 227 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 ETV7Q9Y603 341 aa11.89□□□□□ -0.51
CLCN1-203ENST00000455478 STAB1Q9NY15 2570 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 IGHV3-43A0A0B4J1X8 118 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 LY6LH3BQJ8 138 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 BUB1B-PAK6H3BSN5 160 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 TOR1AO14656 332 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 IGHV3-43DP0DP04 118 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 GNB3P16520 340 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 HMGN3Q15651 99 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 AANATQ16613 207 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 HLA-DRB5Q30154 266 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 C16orf87Q6PH81 154 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 PRR18Q8N4B5 295 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 PIFOQ8TCI5 191 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 SSX3Q99909 188 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 CMSS1Q9BQ75 279 aaKnown RBP11.88□□□□□ -0.51
CLCN1-203ENST00000455478 C19orf24Q9BVV8 132 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 DPAGT1Q9H3H5 408 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 C12orf4Q9NQ89 552 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 ABRACLQ9P1F3 81 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 DPM3Q9P2X0 92 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 SPATA2Q9UM82 520 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 HILPDAQ9Y5L2 63 aa11.88□□□□□ -0.51
CLCN1-203ENST00000455478 DNHD1Q96M86 4753 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 A0A075B6Q4 140 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 A0A1W2PPE3 182 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 POM121CA8CG34 1229 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 VGLL3A8MV65 326 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 GNG10P50151 68 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 LRRC75BQ2VPJ9 315 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 TMEM30BQ3MIR4 351 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 CDNFQ49AH0 187 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 NDNFQ8TB73 568 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 SETD6Q8TBK2 473 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 MMP28Q9H239 520 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 Q9N2K0 584 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 RAB9BQ9NP90 201 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLCN1-203ENST00000455478 ELF5Q9UKW6 265 aaPredicted RBP11.87□□□□□ -0.51
CLCN1-203ENST00000455478 TENM1Q9UKZ4 2725 aa11.87□□□□□ -0.51
CLCN1-203ENST00000455478 SERPINE3A8MV23 424 aa11.86□□□□□ -0.51
CLCN1-203ENST00000455478 LEUTXA8MZ59 168 aa11.86□□□□□ -0.51
CLCN1-203ENST00000455478 H3BUX3 64 aa11.86□□□□□ -0.51
CLCN1-203ENST00000455478 CD3GP09693 182 aa11.86□□□□□ -0.51
CLCN1-203ENST00000455478 RAB13P51153 203 aa11.86□□□□□ -0.51
CLCN1-203ENST00000455478 ZNF134P52741 427 aa11.86□□□□□ -0.51
CLCN1-203ENST00000455478 HTD2P86397 168 aa11.86□□□□□ -0.51
CLCN1-203ENST00000455478 ZNF260Q3ZCT1 412 aa11.86□□□□□ -0.51
CLCN1-203ENST00000455478 Q3ZCU0 254 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms