RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 IFT46Q9NQC8 304 aa9.25□□□□□ -0.93
TRAF4-206ENST00000454852 NOTCH2Q04721 2471 aa9.25□□□□□ -0.93
TRAF4-206ENST00000454852 ITPR3Q14573 2671 aa9.25□□□□□ -0.93
TRAF4-206ENST00000454852 TRBV6-7A0A0A0MS04 114 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 TRAV39A0A0B4J263 110 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 IGKV1-6A0A0C4DH72 117 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 hCG_1809904A0A1W2PP81 198 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 A0A1W2PPE2 198 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 A0A1W2PQ09 198 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 A0A1W2PR64 198 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 A0A1W2PRV1 198 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 ZNF736B4DX44 427 aaPredicted RBP9.24□□□□□ -0.93
TRAF4-206ENST00000454852 ITGB1BP1O14713 200 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 UPK1BO75841 260 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 HBZP02008 142 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 GSTT2P0CG29 244 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 IGHV4-31P0DP07 118 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 CCL3L1P16619 93 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 FPR2P25090 351 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 SSTR5P35346 364 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 LOXL3P58215 753 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 AP3S2P59780 193 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 LCN2P80188 198 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 DYRK1AQ13627 763 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 HERPUD1Q15011 391 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 BTNL3Q6UXE8 466 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 OVCH2Q7RTZ1 564 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 C8orf31Q8N9H6 132 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 ARL11Q969Q4 196 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 TMEM186Q96B77 213 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 GALMQ96C23 342 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 MSI2Q96DH6 328 aaKnown RBP9.24□□□□□ -0.93
TRAF4-206ENST00000454852 KIRREL1Q96J84 757 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 SIRPDQ9H106 197 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 MMP26Q9NRE1 261 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 ING3Q9NXR8 418 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 IDI2-AS1Q9NZ38 188 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 JPT1Q9UK76 154 aa9.24□□□□□ -0.93
TRAF4-206ENST00000454852 ZNF469Q96JG9 3925 aaPredicted RBP9.24□□□□□ -0.93
TRAF4-206ENST00000454852 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.23□□□□□ -0.932e-11■■■■□ 22
TRAF4-206ENST00000454852 MYO9AB2RTY4 2548 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 MEIS3P1A6NDR6 274 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 J3QLI3 93 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 SCTP09683 121 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 IGHV1-8P0DP01 117 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 MMP9P14780 707 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 PRTN3P24158 256 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 CD34P28906 385 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 MEF2DQ14814 521 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 CHRFAM7AQ494W8 412 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 TRIQKQ629K1 86 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 ZNF660Q6AZW8 331 aaPredicted RBP9.23□□□□□ -0.93
TRAF4-206ENST00000454852 CYB5R2Q6BCY4 276 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 OR52W1Q6IF63 320 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 ARRDC1Q8N5I2 433 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 Q8N7P7 452 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 OR1L1Q8NH94 360 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 SETD6Q8TBK2 473 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 ZNF596Q8TC21 504 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 MAFIPQ8WZ33 124 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 BORCS5Q969J3 196 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 C7orf50Q9BRJ6 194 aaKnown RBP9.23□□□□□ -0.93
TRAF4-206ENST00000454852 METTL8Q9H825 291 aaKnown RBP9.23□□□□□ -0.93
TRAF4-206ENST00000454852 NECAP2Q9NVZ3 263 aa9.23□□□□□ -0.93
TRAF4-206ENST00000454852 J3QRK9 145 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 YPEL1O60688 119 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 TUSC2O75896 110 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 CD3DP04234 171 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 AKAIN1P0CW23 69 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 FOSL1P15407 271 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 ZBTB25P24278 435 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 ERVFRD-1P60508 538 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 CDK10Q15131 360 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 RNASE12Q5GAN4 147 aaKnown RBP9.22□□□□□ -0.93
TRAF4-206ENST00000454852 STEAP1BQ6NZ63 245 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 DHRS11Q6UWP2 260 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 GLCCI1Q86VQ1 547 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 H1FOOQ8IZA3 346 aaPredicted RBP9.22□□□□□ -0.93
TRAF4-206ENST00000454852 CIARTQ8N365 385 aaPredicted RBP9.22□□□□□ -0.93
TRAF4-206ENST00000454852 TOMM5Q8N4H5 51 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 OR5H2Q8NGV7 314 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 GIMAP1Q8WWP7 306 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 TNFRSF14Q92956 283 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 YPEL2Q96QA6 119 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 GFOD1Q9NXC2 390 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 SLC2A8Q9NY64 477 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 SESN1Q9Y6P5 492 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 KIAA2026Q5HYC2 2103 aa9.22□□□□□ -0.93
TRAF4-206ENST00000454852 OTOGQ6ZRI0 2925 aa9.21□□□□□ -0.93
TRAF4-206ENST00000454852 NAP1L6A6NFF2 107 aa9.21□□□□□ -0.94
TRAF4-206ENST00000454852 MMP23AO75900 390 aa9.21□□□□□ -0.94
TRAF4-206ENST00000454852 RGS11O94810 467 aa9.21□□□□□ -0.94
TRAF4-206ENST00000454852 ZNF735P0CB33 412 aa9.21□□□□□ -0.94
TRAF4-206ENST00000454852 OR5H8P0DN80 308 aa9.21□□□□□ -0.94
TRAF4-206ENST00000454852 HLA-DMAP28067 261 aa9.21□□□□□ -0.94
TRAF4-206ENST00000454852 HRH1P35367 487 aa9.21□□□□□ -0.94
TRAF4-206ENST00000454852 FAUP35544 74 aaKnown RBP9.21□□□□□ -0.94
TRAF4-206ENST00000454852 ARPC4P59998 168 aa9.21□□□□□ -0.94
TRAF4-206ENST00000454852 ARF6P62330 175 aa9.21□□□□□ -0.94
TRAF4-206ENST00000454852 IFITM3Q01628 133 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms