RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 RAB3DO95716 219 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 IGLV1-47P01700 117 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 IGHV2-5P01817 119 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 PPIAL4FP0DN26 164 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 PRKACBP22694 351 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 RBP2P50120 134 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 P2RX3P56373 397 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 GNG3P63215 75 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 BAMBIQ13145 260 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 PRAMEF6Q5VXH4 476 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 TMUB2Q71RG4 321 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 C6orf201Q7Z4U5 140 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 H1FOOQ8IZA3 346 aaPredicted RBP4.06□□□□□ -1.76
RIF1-207ENST00000454583 Q8N6K4 173 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 RAB3CQ96E17 227 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 OR2V2Q96R30 315 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 TMEM59Q9BXS4 323 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 MED28Q9H204 178 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 ESRP2Q9H6T0 727 aaKnown RBP4.06□□□□□ -1.76
RIF1-207ENST00000454583 CKLFQ9UBR5 152 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 PAIP2BQ9ULR5 123 aaKnown RBP4.06□□□□□ -1.76
RIF1-207ENST00000454583 MEIS3P1A6NDR6 274 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 FAM90A9PA6NNJ1 464 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 ZNF732B4DXR9 585 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 LCE2BO14633 110 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 OR2H2O95918 312 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 PPIAL4GP0DN37 164 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 ADCYAP1P18509 176 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 PAX9P55771 341 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 RBM39Q14498 530 aaKnown RBP4.06□□□□□ -1.76
RIF1-207ENST00000454583 Q3ZCU0 254 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 TOR2AQ5JU69 321 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 AWAT2Q6E213 333 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 ZNF826PQ6ZT77 177 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 BPIFB2Q8N4F0 458 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 LINC00311Q8N616 119 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 KIR3DL3Q8N743 410 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 BVESQ8NE79 360 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 GLYATL2Q8WU03 294 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 SMIM8Q96KF7 97 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 METTL8Q9H825 291 aaKnown RBP4.06□□□□□ -1.76
RIF1-207ENST00000454583 KCNJ16Q9NPI9 418 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 GTF2A1LQ9UNN4 478 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 ABCA4P78363 2273 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 PTPRZ1P23471 2315 aaPredicted RBP4.06□□□□□ -1.76
RIF1-207ENST00000454583 MSGN1A6NI15 193 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 ADARB2-AS1A8MUL3 147 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 HLA-DQA2P01906 255 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 SLC25A6P12236 298 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 GTF2F2P13984 249 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 NFYAP23511 347 aaPredicted RBP4.06□□□□□ -1.76
RIF1-207ENST00000454583 ECI1P42126 302 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 CNN3Q15417 329 aaKnown RBP4.06□□□□□ -1.76
RIF1-207ENST00000454583 ESCO2Q56NI9 601 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 SPERTQ8NA61 448 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 SUMF2Q8NBJ7 301 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 OR5L1Q8NGL2 311 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 OR4K15Q8NH41 348 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 PIFOQ8TCI5 191 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 ITLN1Q8WWA0 313 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 SLAMF9Q96A28 289 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 FAM71F1Q96KD3 344 aaPredicted RBP4.06□□□□□ -1.76
RIF1-207ENST00000454583 SELENOIQ9C0D9 397 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 BANF2Q9H503 90 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 ZMAT3Q9HA38 289 aaKnown RBP4.06□□□□□ -1.76
RIF1-207ENST00000454583 MSL2Q9HCI7 577 aa4.06□□□□□ -1.76
RIF1-207ENST00000454583 FAM90A27PA6NNH2 459 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 PMS2P5A8MQ11 134 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 TRIM77I1YAP6 450 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 NDUFS7O75251 213 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 DEDDO75618 318 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 MMP23AO75900 390 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 HKR1P10072 659 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 ATP1B3P54709 279 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 TNP2Q05952 138 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 DMRTC1Q5HYR2 192 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 ZCCHC24Q8N2G6 241 aaKnown RBP4.05□□□□□ -1.76
RIF1-207ENST00000454583 OR10A7Q8NGE5 316 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 CFHR4Q92496 578 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 PIK3IP1Q96FE7 263 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 CENPMQ9NSP4 180 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 FAM212BQ9NTI7 297 aaPredicted RBP4.05□□□□□ -1.76
RIF1-207ENST00000454583 FBXO9Q9UK97 447 aaPredicted RBP4.05□□□□□ -1.76
RIF1-207ENST00000454583 IGKV1D-13A0A0B4J2D9 117 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 PRSS46E5RG02 174 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 TRAPPC2LH3BP13 241 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 H3BSH0 61 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 PPIHO43447 177 aaKnown RBP4.05□□□□□ -1.76
RIF1-207ENST00000454583 BCL2L11O43521 198 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 PDCD6O75340 191 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 PLATP00750 562 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 TK1P04183 234 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 IGKV1-13P0DP09 117 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 MUC1P15941 1255 aaPredicted RBP4.05□□□□□ -1.76
RIF1-207ENST00000454583 OR3A3P47888 321 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 SNRPD2P62316 118 aaKnown RBP4.05□□□□□ -1.76
RIF1-207ENST00000454583 HTD2P86397 168 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 PAX8Q06710 450 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 OPCMLQ14982 345 aa4.05□□□□□ -1.76
RIF1-207ENST00000454583 AANATQ16613 207 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms