RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 PRR18Q8N4B5 295 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 TMEM229BQ8NBD8 167 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 DUSP18Q8NEJ0 188 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 OR5D13Q8NGL4 314 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 OR56B4Q8NH76 319 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 H1FXQ92522 213 aaKnown RBP9.06□□□□□ -0.96
SCN9A-205ENST00000454569 MBD6Q96DN6 1003 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 NEIL1Q96FI4 390 aaPredicted RBP9.06□□□□□ -0.96
SCN9A-205ENST00000454569 SLC6A7Q99884 636 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 ARPC5LQ9BPX5 153 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 TMPRSS13Q9BYE2 586 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 TAF9BQ9HBM6 251 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 BARX1Q9HBU1 254 aaPredicted RBP9.06□□□□□ -0.96
SCN9A-205ENST00000454569 MCUBQ9NWR8 336 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 COPZ2Q9P299 210 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 MIOXQ9UGB7 285 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 ANXA10Q9UJ72 324 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 PCDHB10Q9UN67 800 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 MYO9AB2RTY4 2548 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.06□□□□□ -0.967e-10■■■■■ 56
SCN9A-205ENST00000454569 TEX15Q9BXT5 2789 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 FUOMA2VDF0 154 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 H3BUI4 141 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 PF4P02776 101 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 AKAIN1P0CW23 69 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 OMGP23515 440 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 GLP1RP43220 463 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 KCNJ3P48549 501 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 MRPS15P82914 257 aaKnown RBP9.05□□□□□ -0.96
SCN9A-205ENST00000454569 HMGN3Q15651 99 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 KCNJ8Q15842 424 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 CR1LQ2VPA4 569 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 LRRC10Q5BKY1 277 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 STEAP1BQ6NZ63 245 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 LDLRAD3Q86YD5 345 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 MAPK1IP1LQ8NDC0 245 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 OR5AP2Q8NGF4 316 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 PPP1R35Q8TAP8 253 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 MRGPRFQ96AM1 343 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 KIRREL1Q96J84 757 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 PIMREGQ9BSJ6 248 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 PARP12Q9H0J9 701 aaKnown RBP9.05□□□□□ -0.96
SCN9A-205ENST00000454569 NOTCH2Q04721 2471 aa9.05□□□□□ -0.96
SCN9A-205ENST00000454569 IGHV3-43A0A0B4J1X8 118 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 ZNF736B4DX44 427 aaPredicted RBP9.04□□□□□ -0.96
SCN9A-205ENST00000454569 TRDCB7Z8K6 153 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 FABP7O15540 132 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 PFDN1O60925 122 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 HBZP02008 142 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 IGHV3-43DP0DP04 118 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 CBX5P45973 191 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 CCR6P51684 374 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 DLX6P56179 175 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 RPL31P62899 125 aaKnown RBP9.04□□□□□ -0.96
SCN9A-205ENST00000454569 HLA-DRB3P79483 266 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 PRB3Q04118 309 aaPredicted RBP9.04□□□□□ -0.96
SCN9A-205ENST00000454569 LTC4SQ16873 150 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 PLA1AQ53H76 456 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 Q5PR19 223 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 Q6ZS49 121 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 LRRC75A-AS1Q8N1F1 130 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 SPICQ8N5J4 248 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 C11orf42Q8N5U0 333 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 OR8B3Q8NGG8 313 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 OR52L2PQ8NGH6 319 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 UPRTQ96BW1 309 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 OR8B2Q96RD0 313 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 RIMS4Q9H426 269 aaPredicted RBP9.04□□□□□ -0.96
SCN9A-205ENST00000454569 ZNF286AQ9HBT8 521 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 OR1A1Q9P1Q5 309 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 ZNF107Q9UII5 783 aaPredicted RBP9.04□□□□□ -0.96
SCN9A-205ENST00000454569 ABCA1O95477 2261 aa9.04□□□□□ -0.96
SCN9A-205ENST00000454569 RAB3DO95716 219 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 IGHV3-7P01780 117 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 GNB2P62879 340 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 LCN2P80188 198 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 PAX2Q02962 417 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 GNMTQ14749 295 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 ZNF660Q6AZW8 331 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-205ENST00000454569 OVCH2Q7RTZ1 564 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 FAM185AQ8N0U4 392 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 OR51S1Q8NGJ8 323 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 CORO2AQ92828 525 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 ARL11Q969Q4 196 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 CREB3L1Q96BA8 519 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 SSBP3Q9BWW4 388 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-205ENST00000454569 MMP26Q9NRE1 261 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 NUDT15Q9NV35 164 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 CLN8Q9UBY8 286 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 NUBP2Q9Y5Y2 271 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 FLNAP21333 2647 aaKnown RBP9.03□□□□□ -0.96
SCN9A-205ENST00000454569 ZFHX3Q15911 3703 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 FAM172BPA6NC97 362 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 NDUFS8O00217 210 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 BET1O15155 118 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 TCRBP04435 133 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 AMY2AP04746 511 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 NFYAP23511 347 aaPredicted RBP9.03□□□□□ -0.96
SCN9A-205ENST00000454569 CDK10Q15131 360 aa9.03□□□□□ -0.96
SCN9A-205ENST00000454569 SRSF7Q16629 238 aaKnown RBP eCLIP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms