RNA–Protein interactions for RNA: ENST00000452724.1

USP40-209, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-209ENST00000452724 Q6ZS52 159 aa1.38□□□□□ -2.19
USP40-209ENST00000452724 MRPL52Q86TS9 123 aaKnown RBP1.38□□□□□ -2.19
USP40-209ENST00000452724 ZFAND2AQ8N6M9 145 aa1.38□□□□□ -2.19
USP40-209ENST00000452724 OR9I1Q8NGQ6 314 aa1.38□□□□□ -2.19
USP40-209ENST00000452724 CAPZA3Q96KX2 299 aa1.38□□□□□ -2.19
USP40-209ENST00000452724 SIKE1Q9BRV8 207 aa1.38□□□□□ -2.19
USP40-209ENST00000452724 PSORS1C2Q9UIG4 136 aa1.38□□□□□ -2.19
USP40-209ENST00000452724 HEY1Q9Y5J3 304 aa1.38□□□□□ -2.19
USP40-209ENST00000452724 OR51B4Q9Y5P0 310 aa1.38□□□□□ -2.19
USP40-209ENST00000452724 MTCH2Q9Y6C9 303 aa1.38□□□□□ -2.19
USP40-209ENST00000452724 ABCB11O95342 1321 aa1.38□□□□□ -2.19
USP40-209ENST00000452724 OTOFQ9HC10 1997 aa1.38□□□□□ -2.19
USP40-209ENST00000452724 ADGRB3O60242 1522 aa1.37□□□□□ -2.19
USP40-209ENST00000452724 ERICH4A6NGS2 130 aa1.37□□□□□ -2.19
USP40-209ENST00000452724 K7EQS6 105 aa1.37□□□□□ -2.19
USP40-209ENST00000452724 ZNF189O75820 626 aaPredicted RBP1.37□□□□□ -2.19
USP40-209ENST00000452724 CRYGDP07320 174 aa1.37□□□□□ -2.19
USP40-209ENST00000452724 OR4A8P0C604 315 aa1.37□□□□□ -2.19
USP40-209ENST00000452724 GABRA4P48169 554 aa1.37□□□□□ -2.19
USP40-209ENST00000452724 PAFAH1B3Q15102 231 aaKnown RBP1.37□□□□□ -2.19
USP40-209ENST00000452724 FBXO48Q5FWF7 155 aa1.37□□□□□ -2.19
USP40-209ENST00000452724 EBLN2Q6P2I7 272 aa1.37□□□□□ -2.19
USP40-209ENST00000452724 OR11L1Q8NGX0 322 aa1.37□□□□□ -2.19
USP40-209ENST00000452724 GALMQ96C23 342 aa1.37□□□□□ -2.19
USP40-209ENST00000452724 DNAJC30Q96LL9 226 aa1.37□□□□□ -2.19
USP40-209ENST00000452724 OR51E2Q9H255 320 aa1.37□□□□□ -2.19
USP40-209ENST00000452724 TRPM3Q9HCF6 1732 aaPredicted RBP1.37□□□□□ -2.19
USP40-209ENST00000452724 COL18A1P39060 1754 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
USP40-209ENST00000452724 A0A0J9YX75 114 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 LOC100506127A0A0U1RQW1 187 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 A0A1W2PQL4 384 aaPredicted RBP1.36□□□□□ -2.19
USP40-209ENST00000452724 ZNF879B4DU55 563 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 F8VP50 259 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 BOLA2-SMG1P6H3BVE0 249 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 LDOC1O95751 146 aaPredicted RBP1.36□□□□□ -2.19
USP40-209ENST00000452724 FBP1P09467 338 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 NQO1P15559 274 aaKnown RBP1.36□□□□□ -2.19
USP40-209ENST00000452724 ZNF7P17097 686 aaPredicted RBP1.36□□□□□ -2.19
USP40-209ENST00000452724 ATF1P18846 271 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 SPAM1P38567 509 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 SKP2Q13309 424 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 FLOT2Q14254 428 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 SS18Q15532 418 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 Q3ZCU0 254 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 FAM229BQ4G0N7 80 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 OR10J3Q5JRS4 329 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 SDIM1Q6ZPB5 146 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 LRRC6Q86X45 466 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 MUC15Q8N387 334 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 SPERTQ8NA61 448 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 OR5D18Q8NGL1 313 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 SUN5Q8TC36 379 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 EBNA1BP2Q99848 306 aaKnown RBP1.36□□□□□ -2.19
USP40-209ENST00000452724 CXCL16Q9H2A7 254 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 MRM2Q9UI43 246 aaKnown RBP1.36□□□□□ -2.19
USP40-209ENST00000452724 SCML1Q9UN30 329 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 STK38LQ9Y2H1 464 aa1.36□□□□□ -2.19
USP40-209ENST00000452724 PTPRKQ15262 1439 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 A0A1B0GX12 115 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 B4DEV8 164 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 TRAPPC3O43617 180 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 RAB36O95755 333 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 PRB1P04280 392 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 PSMA1P25786 263 aaKnown RBP1.35□□□□□ -2.19
USP40-209ENST00000452724 LCN1P31025 176 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 OR2B6P58173 313 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 OR10A3P58181 314 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 GABARAPL2P60520 117 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 DEFA6Q01524 100 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 ZNF117Q03924 483 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 BSPH1Q075Z2 132 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 TMED1Q13445 227 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 HENMT1Q5T8I9 393 aaKnown RBP1.35□□□□□ -2.19
USP40-209ENST00000452724 ZBTB8OSQ8IWT0 167 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 TCAIMQ8N3R3 496 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 ERMNQ8TAM6 284 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 ZNF251Q9BRH9 671 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 SLC19A3Q9BZV2 496 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 C11orf49Q9H6J7 331 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 DMAC2Q9NW81 257 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 FAM206AQ9NX38 181 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 ENPP5Q9UJA9 477 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 MINOS1-NBL1R4GNA1 71 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 MYO15BQ96JP2 1530 aa1.35□□□□□ -2.19
USP40-209ENST00000452724 RAB3GAP2Q9H2M9 1393 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 FNDC10F2Z333 226 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 H3BRN7 92 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 H3BSA7 217 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 K7ERQ8 282 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 YKT6O15498 198 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 CDK14O94921 469 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 SNAP29O95721 258 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 FADS2O95864 444 aaKnown RBP1.34□□□□□ -2.19
USP40-209ENST00000452724 CTSEP14091 401 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 RCVRNP35243 200 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 ACTR1BP42025 376 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 LPAR6P43657 344 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 AKR1C2P52895 323 aa1.34□□□□□ -2.19
USP40-209ENST00000452724 RWDD2BP57060 319 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms