RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 PDCD6O75340 191 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 CRTAPO75718 401 aaPredicted RBP12.76□□□□□ -0.37
SGCE-208ENST00000450385 BPNT1O95861 308 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 SNRNP70P08621 437 aaKnown RBP12.76□□□□□ -0.37
SGCE-208ENST00000450385 TMEM11P17152 192 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 SRMP19623 302 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 CD24P25063 80 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 PSMA1P25786 263 aaKnown RBP12.76□□□□□ -0.37
SGCE-208ENST00000450385 CD1BP29016 333 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 SLC35A2P78381 396 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 NSUN5P1Q3KNT7 163 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 C1orf100Q5SVJ3 147 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 SYT6Q5T7P8 510 aaPredicted RBP12.76□□□□□ -0.37
SGCE-208ENST00000450385 SAMD5Q5TGI4 173 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 SLC25A48Q6ZT89 311 aaKnown RBP12.76□□□□□ -0.37
SGCE-208ENST00000450385 IZUMO1Q8IYV9 350 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 COMMD1Q8N668 190 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 DRAM1Q8N682 238 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 KCNG3Q8TAE7 436 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 CHPT1Q8WUD6 406 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 DUSP21Q9H596 190 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 MBNL3Q9NUK0 354 aaKnown RBP12.76□□□□□ -0.37
SGCE-208ENST00000450385 KCNIP1Q9NZI2 227 aa12.76□□□□□ -0.37
SGCE-208ENST00000450385 PNMA8CA0A1B0GUJ8 204 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 A0A1W2PP11 408 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 ADARB2-AS1A8MUL3 147 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 HSD17B6O14756 317 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 HSPA13P48723 471 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 HTD2P86397 168 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 GABPB1Q06547 395 aaPredicted RBP12.75□□□□□ -0.37
SGCE-208ENST00000450385 HES1Q14469 280 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 TGIF2LXQ8IUE1 241 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 OR2T10Q8NGZ9 312 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 OR56B4Q8NH76 319 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 LEAP2Q969E1 77 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 ST6GALNAC6Q969X2 333 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 OR5M11Q96RB7 305 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 GON7Q9BXV9 100 aa12.75□□□□□ -0.37
SGCE-208ENST00000450385 LSM2Q9Y333 95 aaKnown RBP12.75□□□□□ -0.37
SGCE-208ENST00000450385 PRKDCP78527 4128 aaKnown RBP12.74□□□□□ -0.37
SGCE-208ENST00000450385 IGHV1-3A0A0C4DH29 117 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 TCRBV4S1A1TA0A5B7 111 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 RGS11O94810 467 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 IGHG2P01859 326 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 UCHL1P09936 223 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 MYF6P23409 242 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 GNG10P50151 68 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 PSMD7P51665 324 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 TPBGQ13641 420 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 IRF3Q14653 427 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 LTC4SQ16873 150 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 BEAN1Q3B7T3 259 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 C5orf56Q8N8D9 126 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 CCDC107Q8WV48 283 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 UFD1Q92890 307 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 NEDD4LQ96PU5 975 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 ANKRD60Q9BZ19 345 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 GHITMQ9H3K2 345 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 RIMS4Q9H426 269 aaPredicted RBP12.74□□□□□ -0.37
SGCE-208ENST00000450385 ZFP57Q9NU63 452 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 ZNF581Q9P0T4 197 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 GNG12Q9UBI6 72 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 BOLA1Q9Y3E2 137 aa12.74□□□□□ -0.37
SGCE-208ENST00000450385 C12orf77C9JDV5 145 aa12.73□□□□□ -0.37
SGCE-208ENST00000450385 ARL6IP5O75915 188 aa12.73□□□□□ -0.37
SGCE-208ENST00000450385 DUS4LO95620 317 aaKnown RBP12.73□□□□□ -0.37
SGCE-208ENST00000450385 HBZP02008 142 aa12.73□□□□□ -0.37
SGCE-208ENST00000450385 MED22Q15528 200 aa12.73□□□□□ -0.37
SGCE-208ENST00000450385 HSD17B12Q53GQ0 312 aa12.73□□□□□ -0.37
SGCE-208ENST00000450385 UTF1Q5T230 341 aa12.73□□□□□ -0.37
SGCE-208ENST00000450385 CEACAM19Q7Z692 300 aa12.73□□□□□ -0.37
SGCE-208ENST00000450385 TMEM104Q8NE00 496 aa12.73□□□□□ -0.37
SGCE-208ENST00000450385 RTN4IP1Q8WWV3 396 aaPredicted RBP12.73□□□□□ -0.37
SGCE-208ENST00000450385 BANF2Q9H503 90 aa12.73□□□□□ -0.37
SGCE-208ENST00000450385 NKX1-2Q9UD57 310 aaPredicted RBP12.73□□□□□ -0.37
SGCE-208ENST00000450385 TRAV39A0A0B4J263 110 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 PSMB11A5LHX3 300 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 MOSP00540 346 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 IGKV1D-33P01593 117 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 IGKV1-33P01594 117 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 SLC35B1P78383 322 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 SIGIRRQ6IA17 410 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 PRSS48Q7RTY5 328 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 MOB3BQ86TA1 216 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 LRRTM1Q86UE6 522 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 FOXRED2Q8IWF2 684 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 ZNF439Q8NDP4 499 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 OR6M1Q8NGM8 313 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 GALMQ96C23 342 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 EAF1Q96JC9 268 aaPredicted RBP12.72□□□□□ -0.37
SGCE-208ENST00000450385 CHCHD6Q9BRQ6 235 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 TM2D1Q9BX74 207 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 TMEM59Q9BXS4 323 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 TAF9BQ9HBM6 251 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 LIN7CQ9NUP9 197 aaKnown RBP12.72□□□□□ -0.37
SGCE-208ENST00000450385 JPT1Q9UK76 154 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 MGAT4AQ9UM21 535 aa12.72□□□□□ -0.37
SGCE-208ENST00000450385 G3V4G9 280 aa12.71□□□□□ -0.37
SGCE-208ENST00000450385 SLC22A1O15245 554 aa12.71□□□□□ -0.37
SGCE-208ENST00000450385 RGS10O43665 173 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms