RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 KDM4BO94953 1096 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 CD37P11049 281 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 SLC2A2P11168 524 aaPredicted RBP7.15□□□□□ -1.27
USP6NL-203ENST00000443016 MPZP25189 248 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 EDDM3BP56851 147 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 SRSF4Q08170 494 aaKnown RBP7.15□□□□□ -1.27
USP6NL-203ENST00000443016 PDZK1IP1Q13113 114 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 GLIPR1L1Q6UWM5 242 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 TREML4Q6UXN2 200 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 SLC25A26Q70HW3 274 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 GDPD3Q7L5L3 318 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 OR2W3Q7Z3T1 314 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 CCDC28AQ8IWP9 274 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 OR5R1Q8NH85 324 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 LGALS14Q8TCE9 139 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 WFDC12Q8WWY7 111 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 SLAMF9Q96A28 289 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 PHF21AQ96BD5 680 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 FAM234AQ9H0X4 552 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 PLEKHA2Q9HB19 425 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 RHOFQ9HBH0 211 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 COMMD3Q9UBI1 195 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 SPATA2Q9UM82 520 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 ING4Q9UNL4 249 aa7.15□□□□□ -1.27
USP6NL-203ENST00000443016 FAM90A20PA6NIJ5 464 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 L7N2F9 121 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 SCGNO76038 276 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 SNRPBP14678 240 aaKnown RBP7.14□□□□□ -1.27
USP6NL-203ENST00000443016 COX7A1P24310 79 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 TALDO1P37837 337 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 CLDN12P56749 244 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 ZP1P60852 638 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 COL10A1Q03692 680 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 C9orf152Q5JTZ5 239 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 UBE2NLQ5JXB2 153 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 TMEM200BQ69YZ2 307 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 ZNF782Q6ZMW2 699 aaPredicted RBP7.14□□□□□ -1.27
USP6NL-203ENST00000443016 WFDC3Q8IUB2 231 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 OR4D6Q8NGJ1 314 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 LINC01006Q8NI28 216 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 KCNG3Q8TAE7 436 aa7.14□□□□□ -1.27
USP6NL-203ENST00000443016 NXF2Q9GZY0 626 aaKnown RBP7.14□□□□□ -1.27
USP6NL-203ENST00000443016 IGKV1-27A0A075B6S5 117 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 MEX3AA1L020 520 aaKnown RBP7.13□□□□□ -1.27
USP6NL-203ENST00000443016 H3BUX3 64 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 CHRM2P08172 466 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 CCL3L1P16619 93 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 PTBP1P26599 531 aaKnown RBP eCLIP7.13□□□□□ -1.27
USP6NL-203ENST00000443016 SLC22A6Q4U2R8 563 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 MIDNQ504T8 468 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 LINC00299Q6ZSB3 139 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 LYPD6Q86Y78 171 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 SAMD12Q8N8I0 201 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 OR51D1Q8NGF3 324 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 EMG1Q92979 244 aaKnown RBP7.13□□□□□ -1.27
USP6NL-203ENST00000443016 PTX4Q96A99 478 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 SSX3Q99909 188 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 URM1Q9BTM9 101 aaKnown RBP7.13□□□□□ -1.27
USP6NL-203ENST00000443016 TMEM59Q9BXS4 323 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 GON7Q9BXV9 100 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 PPA2Q9H2U2 334 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 HES4Q9HCC6 221 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 IL36GQ9NZH8 169 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 MTCH1Q9NZJ7 389 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 METTL21EPA6NDL7 271 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 FAM90A18PA6NE21 464 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 FAM90A16PA6NEW6 464 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 FAM90A9PA6NNJ1 464 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 FAM90A5PA8MXJ8 464 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 FAM25AB3EWG3 89 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 FAM25CB3EWG5 89 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 FAM25GB3EWG6 89 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 K7N7A8 449 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 CRTAPO75718 401 aaPredicted RBP7.13□□□□□ -1.27
USP6NL-203ENST00000443016 FAM90A15PP0C7V4 464 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 FAM90A14PP0C7W9 464 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 RAB6AP20340 208 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 SERPINA2P20848 420 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 ERVFRD-1P60508 538 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 ERVK11-1P61568 191 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 EDDM3AQ14507 147 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 BEND2Q8NDZ0 799 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 RNASE8Q8TDE3 154 aaKnown RBP7.13□□□□□ -1.27
USP6NL-203ENST00000443016 MRPS24Q96EL2 167 aaKnown RBP7.13□□□□□ -1.27
USP6NL-203ENST00000443016 NKX3-1Q99801 234 aaPredicted RBP7.13□□□□□ -1.27
USP6NL-203ENST00000443016 FBLN5Q9UBX5 448 aa7.13□□□□□ -1.27
USP6NL-203ENST00000443016 F8VVB4 439 aa7.12□□□□□ -1.27
USP6NL-203ENST00000443016 F8VWA3 439 aa7.12□□□□□ -1.27
USP6NL-203ENST00000443016 APOA1P02647 267 aa7.12□□□□□ -1.27
USP6NL-203ENST00000443016 GTF2F2P13984 249 aa7.12□□□□□ -1.27
USP6NL-203ENST00000443016 GABRR1P24046 479 aa7.12□□□□□ -1.27
USP6NL-203ENST00000443016 SNU13P55769 128 aaKnown RBP7.12□□□□□ -1.27
USP6NL-203ENST00000443016 ZNF273Q14593 569 aa7.12□□□□□ -1.27
USP6NL-203ENST00000443016 LY6EQ16553 131 aa7.12□□□□□ -1.27
USP6NL-203ENST00000443016 Q6ZSV7 163 aa7.12□□□□□ -1.27
USP6NL-203ENST00000443016 RHBDL2Q9NX52 303 aa7.12□□□□□ -1.27
USP6NL-203ENST00000443016 GLS2Q9UI32 602 aa7.12□□□□□ -1.27
USP6NL-203ENST00000443016 RAB22AQ9UL26 194 aa7.12□□□□□ -1.27
USP6NL-203ENST00000443016 TMEM272A0A1B0GTI8 110 aa7.12□□□□□ -1.27
USP6NL-203ENST00000443016 M0QZ24 198 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms