RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SDCBPO00560 298 aaPredicted RBP18.98■□□□□ 0.63
VARS-217ENST00000440048 ARSBP15848 533 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 RCC1P18754 421 aaPredicted RBP18.98■□□□□ 0.63
VARS-217ENST00000440048 CD24P25063 80 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 PSMB9P28065 219 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 BRS3P32247 399 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 ARHGDIBP52566 201 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 LOXL3P58215 753 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 PRR31Q5SQ13 230 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 C6orf183Q5T699 404 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 FAM53AQ6NSI3 398 aaPredicted RBP18.98■□□□□ 0.63
VARS-217ENST00000440048 ZNF773Q6PK81 442 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 OR2W3Q7Z3T1 314 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 FCGR1BQ92637 280 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 SULT4A1Q9BR01 284 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 GFOD1Q9NXC2 390 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 V9GY05 133 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 A0A0A6YYD4 124 aa18.97■□□□□ 0.63
VARS-217ENST00000440048 TRAV1-2A0A0B4J238 106 aa18.97■□□□□ 0.63
VARS-217ENST00000440048 A0A1W2PPE3 182 aa18.97■□□□□ 0.63
VARS-217ENST00000440048 SHISA3A0PJX4 238 aa18.97■□□□□ 0.63
VARS-217ENST00000440048 PSMD7P51665 324 aa18.97■□□□□ 0.63
VARS-217ENST00000440048 CLDN12P56749 244 aa18.97■□□□□ 0.63
VARS-217ENST00000440048 CCDC144NLQ6NUI1 221 aa18.97■□□□□ 0.63
VARS-217ENST00000440048 C6orf201Q7Z4U5 140 aa18.97■□□□□ 0.63
VARS-217ENST00000440048 MRPL30Q8TCC3 161 aaKnown RBP18.97■□□□□ 0.63
VARS-217ENST00000440048 RPEQ96AT9 228 aa18.97■□□□□ 0.63
VARS-217ENST00000440048 FAAP24Q9BTP7 215 aa18.97■□□□□ 0.63
VARS-217ENST00000440048 LPAR5Q9H1C0 372 aa18.97■□□□□ 0.63
VARS-217ENST00000440048 IGHV3-43A0A0B4J1X8 118 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 SPINT2O43291 252 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 IGHV3-43DP0DP04 118 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 GALP22466 123 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 BLVRBP30043 206 aaPredicted RBP18.96■□□□□ 0.63
VARS-217ENST00000440048 EFNB2P52799 333 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 MADCAM1Q13477 382 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 TRAT1Q6PIZ9 186 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 OR51D1Q8NGF3 324 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 OR1L1Q8NH94 360 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 OR2T6Q8NHC8 308 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 TOMM40LQ969M1 308 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 ZNF702PQ9H963 129 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 RAB9BQ9NP90 201 aa18.96■□□□□ 0.63
VARS-217ENST00000440048 MBNL3Q9NUK0 354 aaKnown RBP18.96■□□□□ 0.63
VARS-217ENST00000440048 HBZP02008 142 aa18.95■□□□□ 0.62
VARS-217ENST00000440048 MYL9P24844 172 aa18.95■□□□□ 0.62
VARS-217ENST00000440048 MNDAP41218 407 aa18.95■□□□□ 0.62
VARS-217ENST00000440048 DIAPH2-AS1Q14236 149 aa18.95■□□□□ 0.62
VARS-217ENST00000440048 HES5Q5TA89 166 aa18.95■□□□□ 0.62
VARS-217ENST00000440048 C22orf42Q6IC83 251 aa18.95■□□□□ 0.62
VARS-217ENST00000440048 PRR18Q8N4B5 295 aa18.95■□□□□ 0.62
VARS-217ENST00000440048 DTX3Q8N9I9 347 aa18.95■□□□□ 0.62
VARS-217ENST00000440048 OR10X1Q8NGY0 326 aa18.95■□□□□ 0.62
VARS-217ENST00000440048 FAM3DQ96BQ1 224 aa18.95■□□□□ 0.62
VARS-217ENST00000440048 URM1Q9BTM9 101 aaKnown RBP18.95■□□□□ 0.62
VARS-217ENST00000440048 TAF9BQ9HBM6 251 aa18.95■□□□□ 0.62
VARS-217ENST00000440048 PDCD5O14737 125 aa18.94■□□□□ 0.62
VARS-217ENST00000440048 SOCS1O15524 211 aa18.94■□□□□ 0.62
VARS-217ENST00000440048 OR10A3P58181 314 aa18.94■□□□□ 0.62
VARS-217ENST00000440048 C2orf76Q3KRA6 126 aa18.94■□□□□ 0.62
VARS-217ENST00000440048 FBLN7Q53RD9 439 aa18.94■□□□□ 0.62
VARS-217ENST00000440048 Q8N2B8 174 aa18.94■□□□□ 0.62
VARS-217ENST00000440048 FAM89BQ8N5H3 189 aa18.94■□□□□ 0.62
VARS-217ENST00000440048 LINC00311Q8N616 119 aa18.94■□□□□ 0.62
VARS-217ENST00000440048 STEAP1Q9UHE8 339 aa18.94■□□□□ 0.62
VARS-217ENST00000440048 WNK1Q9H4A3 2382 aa18.94■□□□□ 0.62
VARS-217ENST00000440048 VWFP04275 2813 aa18.93■□□□□ 0.62
VARS-217ENST00000440048 RANBP1P43487 201 aa18.93■□□□□ 0.62
VARS-217ENST00000440048 HABP2Q14520 560 aaPredicted RBP18.93■□□□□ 0.62
VARS-217ENST00000440048 TMEM30BQ3MIR4 351 aa18.93■□□□□ 0.62
VARS-217ENST00000440048 KCTD21Q4G0X4 260 aa18.93■□□□□ 0.62
VARS-217ENST00000440048 C11orf88Q6PI97 169 aa18.93■□□□□ 0.62
VARS-217ENST00000440048 C16orf82Q7Z2V1 217 aa18.93■□□□□ 0.62
VARS-217ENST00000440048 C5orf24Q7Z6I8 188 aa18.93■□□□□ 0.62
VARS-217ENST00000440048 C8orf31Q8N9H6 132 aa18.93■□□□□ 0.62
VARS-217ENST00000440048 PRSS22Q9GZN4 317 aa18.93■□□□□ 0.62
VARS-217ENST00000440048 PLEKHJ1Q9NW61 149 aa18.93■□□□□ 0.62
VARS-217ENST00000440048 KCNIP1Q9NZI2 227 aa18.93■□□□□ 0.62
VARS-217ENST00000440048 GNG12Q9UBI6 72 aa18.93■□□□□ 0.62
VARS-217ENST00000440048 A0A1W2PPI3 338 aa18.92■□□□□ 0.62
VARS-217ENST00000440048 TIMM23O14925 209 aa18.92■□□□□ 0.62
VARS-217ENST00000440048 LDLRAD4O15165 306 aa18.92■□□□□ 0.62
VARS-217ENST00000440048 RAB7AP51149 207 aa18.92■□□□□ 0.62
VARS-217ENST00000440048 BLCAPP62952 87 aa18.92■□□□□ 0.62
VARS-217ENST00000440048 Q3ZCU0 254 aa18.92■□□□□ 0.62
VARS-217ENST00000440048 ZNF554Q86TJ5 538 aa18.92■□□□□ 0.62
VARS-217ENST00000440048 OR10V1Q8NGI7 309 aa18.92■□□□□ 0.62
VARS-217ENST00000440048 CAPSLQ8WWF8 208 aa18.92■□□□□ 0.62
VARS-217ENST00000440048 OCSTAMPQ9BR26 566 aa18.92■□□□□ 0.62
VARS-217ENST00000440048 LIN7BQ9HAP6 207 aa18.92■□□□□ 0.62
VARS-217ENST00000440048 STUB1Q9UNE7 303 aa18.92■□□□□ 0.62
VARS-217ENST00000440048 TMEM272A0A1B0GTI8 110 aa18.91■□□□□ 0.62
VARS-217ENST00000440048 FOXI3A8MTJ6 420 aaPredicted RBP18.91■□□□□ 0.62
VARS-217ENST00000440048 SLC31A2O15432 143 aa18.91■□□□□ 0.62
VARS-217ENST00000440048 RAB3BP20337 219 aa18.91■□□□□ 0.62
VARS-217ENST00000440048 Q6ZS46 218 aa18.91■□□□□ 0.62
VARS-217ENST00000440048 OR8H3Q8N146 312 aa18.91■□□□□ 0.62
VARS-217ENST00000440048 DRAM1Q8N682 238 aa18.91■□□□□ 0.62
VARS-217ENST00000440048 ZNF439Q8NDP4 499 aa18.91■□□□□ 0.62
VARS-217ENST00000440048 OR56B4Q8NH76 319 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms