RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 CHPT1Q8WUD6 406 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 CCDC107Q8WV48 283 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 SGCDQ92629 289 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 ST6GALNAC6Q969X2 333 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 UQCC2Q9BRT2 126 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 FKBP14Q9NWM8 211 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 TRAPPC2LQ9UL33 140 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 C12orf77C9JDV5 145 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 PIN1P1O15428 100 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 SPINT2O43291 252 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 IGHG2P01859 326 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 GLAP06280 429 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 IGLL1P15814 213 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 MGMTP16455 207 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 IL3RAP26951 378 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 ZNF137PP52743 207 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 HNF4GQ14541 408 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 KHDC1LQ5JSQ8 128 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 SYT6Q5T7P8 510 aaPredicted RBP12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 FOXB2Q5VYV0 432 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 SLC25A48Q6ZT89 311 aaKnown RBP12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 TGIF2LXQ8IUE1 241 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 NANOGP1Q8N7R0 232 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 ZNF439Q8NDP4 499 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 TMEM104Q8NE00 496 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 BPIFB6Q8NFQ5 453 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 UBALD1Q8TB05 177 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 RTN4IP1Q8WWV3 396 aaPredicted RBP12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 RCC1LQ96I51 464 aaKnown RBP12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 Q96M66 194 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 VCXQ9H320 206 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 AURKAIP1Q9NWT8 199 aaPredicted RBP12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 ETAA1Q9NY74 926 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 GHRLQ9UBU3 117 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 ERGIC3Q9Y282 383 aa12.88□□□□□ -0.35
SNRPD3-204ENST00000439775 TXNL1O43396 289 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 CRTAPO75718 401 aaPredicted RBP12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 DUS4LO95620 317 aaKnown RBP12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 REG1BP48304 166 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 RNLSQ5VYX0 342 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 MOB3BQ86TA1 216 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 ZNF329Q86UD4 541 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 COMMD1Q8N668 190 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 Q8N6K4 173 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 MRAPQ8TCY5 172 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 EAF1Q96JC9 268 aaPredicted RBP12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 MND1Q9BWT6 205 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 SELENOIQ9C0D9 397 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 BANF2Q9H503 90 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 GNG12Q9UBI6 72 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 PEX16Q9Y5Y5 336 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 DNAH3Q8TD57 4116 aa12.87□□□□□ -0.35
SNRPD3-204ENST00000439775 IGHV3-43A0A0B4J1X8 118 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 SERPINE3A8MV23 424 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 HBZP02008 142 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 IGHV3-43DP0DP04 118 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 FUT3P21217 361 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 CD1BP29016 333 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 SLC6A1P30531 599 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 RPL23AP62750 156 aaKnown RBP12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 GPR50Q13585 617 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 SIGIRRQ6IA17 410 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 FAM53AQ6NSI3 398 aaPredicted RBP12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 SLC35E3Q7Z769 313 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 ZNF554Q86TJ5 538 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 FOXRED2Q8IWF2 684 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 OR51D1Q8NGF3 324 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 OR2T10Q8NGZ9 312 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 OR4K15Q8NH41 348 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 TFAP2CQ92754 450 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 NOL4LQ96MY1 436 aaPredicted RBP12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 CST11Q9H112 138 aa12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 MBNL3Q9NUK0 354 aaKnown RBP12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 LIN7CQ9NUP9 197 aaKnown RBP12.86□□□□□ -0.35
SNRPD3-204ENST00000439775 IGHV3-72A0A0B4J1Y9 119 aa12.85□□□□□ -0.35
SNRPD3-204ENST00000439775 SLC31A2O15432 143 aa12.85□□□□□ -0.35
SNRPD3-204ENST00000439775 PDCD6O75340 191 aa12.85□□□□□ -0.35
SNRPD3-204ENST00000439775 CDK1P06493 297 aa12.85□□□□□ -0.35
SNRPD3-204ENST00000439775 UBBP0CG47 229 aa12.85□□□□□ -0.35
SNRPD3-204ENST00000439775 SLC35B1P78383 322 aa12.85□□□□□ -0.35
SNRPD3-204ENST00000439775 STEAP3Q658P3 488 aa12.85□□□□□ -0.35
SNRPD3-204ENST00000439775 STPG2Q8N412 459 aa12.85□□□□□ -0.35
SNRPD3-204ENST00000439775 MS4A15Q8N5U1 240 aa12.85□□□□□ -0.35
SNRPD3-204ENST00000439775 LINC00482Q8N8I6 264 aa12.85□□□□□ -0.35
SNRPD3-204ENST00000439775 OR8H1Q8NGG4 311 aa12.85□□□□□ -0.35
SNRPD3-204ENST00000439775 ABCG5Q9H222 651 aa12.85□□□□□ -0.35
SNRPD3-204ENST00000439775 NCBP2LA6PVI3 153 aaKnown RBP12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 AP4M1O00189 453 aa12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 MOSP00540 346 aa12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 RCC1P18754 421 aaPredicted RBP12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 CT45A1Q5HYN5 189 aa12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 UNQ9370/PRO34162Q6UXP9 181 aa12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 ETV3LQ6ZN32 361 aa12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 OR2W3Q7Z3T1 314 aa12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 PRR18Q8N4B5 295 aa12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 Q8N9W7 124 aa12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 OR1L1Q8NH94 360 aa12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 CT45A3Q8NHU0 189 aa12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 PHYHIPQ92561 330 aa12.84□□□□□ -0.35
SNRPD3-204ENST00000439775 TAF9BQ9HBM6 251 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms