RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 FAM53AQ6NSI3 398 aaPredicted RBP13.29□□□□□ -0.28
TOM1-207ENST00000439512 SHISA2Q6UWI4 295 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 CCBE1Q6UXH8 406 aaPredicted RBP13.29□□□□□ -0.28
TOM1-207ENST00000439512 SLC16A12Q6ZSM3 486 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 TMEM219Q86XT9 240 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 GAPTQ8N292 157 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 PRR18Q8N4B5 295 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 RAB18Q9NP72 206 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 PLEKHJ1Q9NW61 149 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 TXNL4BQ9NX01 149 aaKnown RBP13.29□□□□□ -0.28
TOM1-207ENST00000439512 KCNIP1Q9NZI2 227 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 STEAP1Q9UHE8 339 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 STUB1Q9UNE7 303 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 SSR3Q9UNL2 185 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 TCF19Q9Y242 345 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 RNF114Q9Y508 228 aa13.29□□□□□ -0.28
TOM1-207ENST00000439512 IGHV3-43A0A0B4J1X8 118 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 A6NDX4 124 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 IFITM5A6NNB3 132 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 SOCS1O15524 211 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 CHST1O43916 411 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 TSPAN9O75954 239 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 IGHV3-43DP0DP04 118 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 RAB3BP20337 219 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 CD24P25063 80 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 FGF9P31371 208 aaPredicted RBP13.28□□□□□ -0.28
TOM1-207ENST00000439512 BRS3P32247 399 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 C5orf24Q7Z6I8 188 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 FAM89BQ8N5H3 189 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 OR52M1Q8NGK5 317 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 OR1L1Q8NH94 360 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 MRPL30Q8TCC3 161 aaKnown RBP13.28□□□□□ -0.28
TOM1-207ENST00000439512 OR51E2Q9H255 320 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 C16orf95Q9H693 158 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 TAF9BQ9HBM6 251 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 RAB9BQ9NP90 201 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 GFOD1Q9NXC2 390 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 PITPNC1Q9UKF7 332 aa13.28□□□□□ -0.28
TOM1-207ENST00000439512 SMIM30A4D0T7 59 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 HBZP02008 142 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 VEGFCP49767 419 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 LOXL3P58215 753 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 PLA2G7Q13093 441 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 TRAT1Q6PIZ9 186 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 LIAT1Q6ZQX7 453 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 TSPAN14Q8NG11 270 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 OR10X1Q8NGY0 326 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 RPEQ96AT9 228 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 GNG12Q9UBI6 72 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 FBLN5Q9UBX5 448 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 RAB22AQ9UL26 194 aa13.27□□□□□ -0.29
TOM1-207ENST00000439512 AMMECR1Q9Y4X0 333 aaPredicted RBP13.27□□□□□ -0.29
TOM1-207ENST00000439512 TMEM272A0A1B0GTI8 110 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 OOSP1A8MZH6 123 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 LDLRAD4O15165 306 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 RRP9O43818 475 aaKnown RBP13.26□□□□□ -0.29
TOM1-207ENST00000439512 CD36P16671 472 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 MNDAP41218 407 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 ARHGDIBP52566 201 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 SRSF4Q08170 494 aaKnown RBP13.26□□□□□ -0.29
TOM1-207ENST00000439512 MADCAM1Q13477 382 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 CCDC144NLQ6NUI1 221 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 NR2C2APQ86WQ0 139 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 OR4C13Q8NGP0 309 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 CHCHD6Q9BRQ6 235 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 NPFFR1Q9GZQ6 430 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 CHMP1AQ9HD42 196 aaPredicted RBP13.26□□□□□ -0.29
TOM1-207ENST00000439512 MBNL3Q9NUK0 354 aaKnown RBP13.26□□□□□ -0.29
TOM1-207ENST00000439512 SIGLEC9Q9Y336 463 aa13.26□□□□□ -0.29
TOM1-207ENST00000439512 A0A087WXM4 84 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 A0A0B4J203 849 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 LOC100506127A0A0U1RQW1 187 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 TNFAIP8O95379 198 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 SLC2A2P11168 524 aaPredicted RBP13.25□□□□□ -0.29
TOM1-207ENST00000439512 GADD45AP24522 165 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 KIR2DS4P43632 304 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 TMEM50BP56557 158 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 DIAPH2-AS1Q14236 149 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 Q6ZTK2 550 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 OR56B1Q8NGI3 324 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 OR10V1Q8NGI7 309 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 SETD6Q8TBK2 473 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 WFDC12Q8WWY7 111 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 TOMM40LQ969M1 308 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 OR2S2Q9NQN1 319 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 AK3Q9UIJ7 227 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 HSF4Q9ULV5 492 aa13.25□□□□□ -0.29
TOM1-207ENST00000439512 FOXI3A8MTJ6 420 aaPredicted RBP13.24□□□□□ -0.29
TOM1-207ENST00000439512 EFNB2P52799 333 aa13.24□□□□□ -0.29
TOM1-207ENST00000439512 PROK1P58294 105 aa13.24□□□□□ -0.29
TOM1-207ENST00000439512 TPRA1Q86W33 373 aa13.24□□□□□ -0.29
TOM1-207ENST00000439512 LINC00311Q8N616 119 aa13.24□□□□□ -0.29
TOM1-207ENST00000439512 OR52L2PQ8NGH6 319 aa13.24□□□□□ -0.29
TOM1-207ENST00000439512 CAPSLQ8WWF8 208 aa13.24□□□□□ -0.29
TOM1-207ENST00000439512 ARHGAP5-AS1Q96IT6 56 aa13.24□□□□□ -0.29
TOM1-207ENST00000439512 KCTD7Q96MP8 289 aa13.24□□□□□ -0.29
TOM1-207ENST00000439512 OCSTAMPQ9BR26 566 aa13.24□□□□□ -0.29
TOM1-207ENST00000439512 PECRQ9BY49 303 aa13.24□□□□□ -0.29
TOM1-207ENST00000439512 RNF167Q9H6Y7 350 aa13.24□□□□□ -0.29
TOM1-207ENST00000439512 LIN7BQ9HAP6 207 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms