RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 KLHDC1Q8N7A1 406 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 LPAR5Q9H1C0 372 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 PIGLQ9Y2B2 252 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 ANGPTL7O43827 346 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 S100GP29377 79 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 IL13RA2Q14627 380 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 PCK2Q16822 640 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 TDRG1Q3Y452 100 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 RNF144BQ7Z419 303 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 STPG4Q8N801 248 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 KCNK17Q96T54 332 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 OR6C3Q9NZP0 311 aa13.71□□□□□ -0.21
DHFR-201ENST00000439211 TICRRQ7Z2Z1 1910 aa13.71□□□□□ -0.22
DHFR-201ENST00000439211 DIRC3C9JPN6 131 aa13.71□□□□□ -0.22
DHFR-201ENST00000439211 TOX4O94842 621 aa13.71□□□□□ -0.22
DHFR-201ENST00000439211 OR4F5Q8NH21 305 aa13.71□□□□□ -0.22
DHFR-201ENST00000439211 LHX4Q969G2 390 aa13.71□□□□□ -0.22
DHFR-201ENST00000439211 AP1S3Q96PC3 154 aa13.71□□□□□ -0.22
DHFR-201ENST00000439211 OR4F4Q96R69 305 aa13.71□□□□□ -0.22
DHFR-201ENST00000439211 AURKAIP1Q9NWT8 199 aaPredicted RBP13.71□□□□□ -0.22
DHFR-201ENST00000439211 LIPT2A6NK58 231 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 PIAS2O75928 621 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 BCL2P10415 239 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 IGFBP3P17936 291 aaPredicted RBP13.7□□□□□ -0.22
DHFR-201ENST00000439211 KISS1Q15726 138 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 NOXO1Q8NFA2 376 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 SPTBN2O15020 2390 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 DYNLT3P51808 116 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 VAX1Q5SQQ9 334 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 FAM166AQ6J272 317 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 DOK3Q7L591 496 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 ARHGEF39Q8N4T4 335 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 CLDND2Q8NHS1 167 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 ORAOV1Q8WV07 137 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 SDF2L1Q9HCN8 221 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 MANBALQ9NQG1 85 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 OSGIN2Q9Y236 505 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 TRIOO75962 3097 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 HRASP01112 189 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 BRICD5Q6PL45 260 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 C6orf201Q7Z4U5 140 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 CDH20Q9HBT6 801 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 SLC35D1Q9NTN3 355 aa13.7□□□□□ -0.22
DHFR-201ENST00000439211 C19orf25Q9UFG5 118 aaPredicted RBP13.7□□□□□ -0.22
DHFR-201ENST00000439211 ISG15P05161 165 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 TDGF1P13385 188 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 PMCHP20382 165 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 BMI1P35226 326 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 SMIM12Q96EX1 92 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 SCRT1Q9BWW7 348 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 RBKSQ9H477 322 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 FAM206AQ9NX38 181 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 PLA2G3Q9NZ20 509 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 IGKV3D-11A0A0A0MRZ8 115 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 NTF3P20783 257 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 MRPL52Q86TS9 123 aaKnown RBP13.69□□□□□ -0.22
DHFR-201ENST00000439211 CALHM1Q8IU99 346 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 FAM58AQ8N1B3 248 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 SPIN2AQ99865 258 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 SPIN2BQ9BPZ2 258 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 ULBP2Q9BZM5 246 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 CACNA1EQ15878 2313 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 NPIPB7O75200 414 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 BMP5P22003 454 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 PPP1CBP62140 327 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 C20orf196Q8IYI0 205 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 OR4B1Q8NGF8 309 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 OR52M1Q8NGK5 317 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 PLEKHF2Q9H8W4 249 aa13.69□□□□□ -0.22
DHFR-201ENST00000439211 OR6C6A6NF89 314 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 GLB1P16278 677 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 TNFSF4P23510 183 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 RND2P52198 227 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 PDCD1Q15116 288 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 MSMO1Q15800 293 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 KCNMB1Q16558 191 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 ZNF442Q9H7R0 627 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 CEP250Q9BV73 2442 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 A0A1W2PN81 502 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 TRAF3IP2O43734 574 aaPredicted RBP13.68□□□□□ -0.22
DHFR-201ENST00000439211 CRISP2P16562 243 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 PSMB3P49720 205 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 OR2D3Q8NGH3 330 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 ZNF286AQ9HBT8 521 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 CFIP05156 583 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 ANKRD37Q7Z713 158 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 CADM4Q8NFZ8 388 aa13.68□□□□□ -0.22
DHFR-201ENST00000439211 LOC102723971A0A1B0GUV8 181 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 A0A1B0GW64 132 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 SPSB3Q6PJ21 355 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 TCTEX1D1Q8N7M0 179 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 PTX4Q96A99 478 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 BORCS8Q96FH0 119 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 C20orf144Q9BQM9 153 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 LHFPL6Q9Y693 200 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 ZDBF2Q9HCK1 2354 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 AMTP48728 403 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 ZNF468Q5VIY5 522 aaPredicted RBP13.67□□□□□ -0.22
DHFR-201ENST00000439211 GJC3Q8NFK1 279 aa13.67□□□□□ -0.22
DHFR-201ENST00000439211 USP34Q70CQ2 3546 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms