RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 C16orf95Q9H693 158 aa10.66□□□□□ -0.7
LINC00399-201ENST00000439008 PLGRKTQ9HBL7 147 aa10.66□□□□□ -0.7
LINC00399-201ENST00000439008 SPACA1Q9HBV2 294 aa10.66□□□□□ -0.7
LINC00399-201ENST00000439008 TXNL4BQ9NX01 149 aaKnown RBP10.66□□□□□ -0.7
LINC00399-201ENST00000439008 TCF19Q9Y242 345 aa10.66□□□□□ -0.7
LINC00399-201ENST00000439008 TMEM272A0A1B0GTI8 110 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 CLPSL1A2RUU4 121 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 BTBD17A6NE02 478 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 POM121CA8CG34 1229 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 F2RL2O00254 374 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 SLC31A2O15432 143 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 GLAP06280 429 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 ARSBP15848 533 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 GZMHP20718 246 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 ZNF134P52741 427 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 RBM39Q14498 530 aaKnown RBP10.65□□□□□ -0.7
LINC00399-201ENST00000439008 NEDD8Q15843 81 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 NKAPLQ5M9Q1 402 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 TPTE2P1Q5T6R2 138 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 ZNF439Q8NDP4 499 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 OR9G1Q8NH87 305 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 ZNF596Q8TC21 504 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 HDHD3Q9BSH5 251 aaPredicted RBP10.65□□□□□ -0.7
LINC00399-201ENST00000439008 MMP28Q9H239 520 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 MBNL3Q9NUK0 354 aaKnown RBP10.65□□□□□ -0.7
LINC00399-201ENST00000439008 RNF114Q9Y508 228 aa10.65□□□□□ -0.7
LINC00399-201ENST00000439008 HAX1O00165 279 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 ORC5O43913 435 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 HBZP02008 142 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 SLC2A2P11168 524 aaPredicted RBP10.64□□□□□ -0.71
LINC00399-201ENST00000439008 GALP22466 123 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 GADD45AP24522 165 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 BLVRBP30043 206 aaPredicted RBP10.64□□□□□ -0.71
LINC00399-201ENST00000439008 FGF9P31371 208 aaPredicted RBP10.64□□□□□ -0.71
LINC00399-201ENST00000439008 HABP2Q14520 560 aaPredicted RBP10.64□□□□□ -0.71
LINC00399-201ENST00000439008 GNMTQ14749 295 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 MOGAT2Q3SYC2 334 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 OR2W3Q7Z3T1 314 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 OR10A7Q8NGE5 316 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 FCGR1BQ92637 280 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 ZNF702PQ9H963 129 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 BEX1Q9HBH7 125 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 TAF9BQ9HBM6 251 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 GFOD1Q9NXC2 390 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 TRAPPC2LQ9UL33 140 aa10.64□□□□□ -0.71
LINC00399-201ENST00000439008 A0A1W2PPI3 338 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 IFITM5A6NNB3 132 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 LEUTXA8MZ59 168 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 SDCBPO00560 298 aaPredicted RBP10.63□□□□□ -0.71
LINC00399-201ENST00000439008 TOR1AO14656 332 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 NAPSAO96009 420 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 CLEC2LP0C7M8 214 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 RAB3BP20337 219 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 VEGFCP49767 419 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 PRRX1P54821 245 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 BLCAPP62952 87 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 PLAC9Q5JTB6 97 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 ZNF880Q6PDB4 577 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 OR52L2PQ8NGH6 319 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 OR10V1Q8NGI7 309 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 OR52M1Q8NGK5 317 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 CFHR4Q92496 578 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 NEDD4LQ96PU5 975 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 STEAP1Q9UHE8 339 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 AK3Q9UIJ7 227 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 STUB1Q9UNE7 303 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 KCNK7Q9Y2U2 307 aa10.63□□□□□ -0.71
LINC00399-201ENST00000439008 FAM90A9PA6NNJ1 464 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 CA11O75493 328 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 AMY1AP04745 511 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 AMY2AP04746 511 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 TGFBR1P36897 503 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 CT45A1Q5HYN5 189 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 SHISA2Q6UWI4 295 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 SLC16A12Q6ZSM3 486 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 PRR18Q8N4B5 295 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 CT45A3Q8NHU0 189 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 ST6GALNAC6Q969X2 333 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 ARHGAP5-AS1Q96IT6 56 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 CITED1Q99966 193 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 CHCHD6Q9BRQ6 235 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 CENPOQ9BU64 300 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 PECRQ9BY49 303 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 ABCB10Q9NRK6 738 aa10.62□□□□□ -0.71
LINC00399-201ENST00000439008 A0A1B0GUS0 222 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 TRIM64CA6NLI5 447 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 TIMM23O14925 209 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 CD36P16671 472 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 MYL9P24844 172 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 SDC2P34741 201 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 KIR2DS4P43632 304 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 REG1BP48304 166 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 HMGN3Q15651 99 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 TMEM95Q3KNT9 176 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 Q8N2B8 174 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 LINC00311Q8N616 119 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 PARP12Q9H0J9 701 aaKnown RBP10.61□□□□□ -0.71
LINC00399-201ENST00000439008 LIN7BQ9HAP6 207 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 SERTAD4Q9NUC0 356 aa10.61□□□□□ -0.71
LINC00399-201ENST00000439008 PLEKHJ1Q9NW61 149 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms