RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 IFITM5A6NNB3 132 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 BUB1B-PAK6H3BSN5 160 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 J3QR06 171 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 F2RL2O00254 374 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 SDCBPO00560 298 aaPredicted RBP9.25□□□□□ -0.93
COL28A1-203ENST00000435823 IGHV3-7P01780 117 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 CD36P16671 472 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 MDKP21741 143 aaPredicted RBP9.25□□□□□ -0.93
COL28A1-203ENST00000435823 BRS3P32247 399 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 OR10A3P58181 314 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 C2orf76Q3KRA6 126 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 TMEM30BQ3MIR4 351 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 LDLRAD2Q5SZI1 272 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 CCDC144NLQ6NUI1 221 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 C6orf201Q7Z4U5 140 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 TPRA1Q86W33 373 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 GAPTQ8N292 157 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 PRR18Q8N4B5 295 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 OR52M1Q8NGK5 317 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 KCTD7Q96MP8 289 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 SULT4A1Q9BR01 284 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 FAAP24Q9BTP7 215 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 OR51E2Q9H255 320 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 CHMP1AQ9HD42 196 aaPredicted RBP9.25□□□□□ -0.93
COL28A1-203ENST00000435823 PLEKHJ1Q9NW61 149 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 FBLN5Q9UBX5 448 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 PITPNC1Q9UKF7 332 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 RAB22AQ9UL26 194 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 PSG11Q9UQ72 335 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 TCF19Q9Y242 345 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 MMP24Q9Y5R2 645 aa9.25□□□□□ -0.93
COL28A1-203ENST00000435823 TMEM272A0A1B0GTI8 110 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 CLPSL1A2RUU4 121 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 POM121CA8CG34 1229 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 OOSP1A8MZH6 123 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 C12orf77C9JDV5 145 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 C15orf65H3BRN8 121 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 RCC1P18754 421 aaPredicted RBP9.24□□□□□ -0.93
COL28A1-203ENST00000435823 CFPP27918 469 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 MNDAP41218 407 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 VEGFCP49767 419 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 GNG10P50151 68 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 RAB13P51153 203 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 DYNLT3P51808 116 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 RELBQ01201 579 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 TIMM50Q3ZCQ8 353 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 TPTE2P1Q5T6R2 138 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 ZNF554Q86TJ5 538 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 FAM89BQ8N5H3 189 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 DTX3Q8N9I9 347 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 OR56B1Q8NGI3 324 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 OR10X1Q8NGY0 326 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 UBALD1Q8TB05 177 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 MRPL30Q8TCC3 161 aaKnown RBP9.24□□□□□ -0.93
COL28A1-203ENST00000435823 PIFOQ8TCI5 191 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 LEAP2Q969E1 77 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 RPEQ96AT9 228 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 CHCHD6Q9BRQ6 235 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 ZNF747Q9BV97 191 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 RIMS4Q9H426 269 aaPredicted RBP9.24□□□□□ -0.93
COL28A1-203ENST00000435823 ZNF696Q9H7X3 374 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 LIN7BQ9HAP6 207 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 MBNL3Q9NUK0 354 aaKnown RBP9.24□□□□□ -0.93
COL28A1-203ENST00000435823 GFOD1Q9NXC2 390 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 GNG12Q9UBI6 72 aa9.24□□□□□ -0.93
COL28A1-203ENST00000435823 DNHD1Q96M86 4753 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 A0A0A6YYD4 124 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 IGHV3-43A0A0B4J1X8 118 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 LOC100506127A0A0U1RQW1 187 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 NOTOA8MTQ0 251 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 LDLRAD4O15165 306 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 SOCS1O15524 211 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 HBZP02008 142 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 IGHV3-43DP0DP04 118 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 RAB6AP20340 208 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 GADD45AP24522 165 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 IL3RAP26951 378 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 MADCAM1Q13477 382 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 Q3ZCU0 254 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 OLFML2AQ68BL7 652 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 Q6ZSV7 163 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 Q6ZTK2 550 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 MOB1BQ7L9L4 216 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 OR4C13Q8NGP0 309 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 OR1L1Q8NH94 360 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 SETD6Q8TBK2 473 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 TOMM40LQ969M1 308 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 NPFFR1Q9GZQ6 430 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 TAF9BQ9HBM6 251 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 ABRACLQ9P1F3 81 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 HSF4Q9ULV5 492 aa9.23□□□□□ -0.93
COL28A1-203ENST00000435823 A0A1W2PPE3 182 aa9.22□□□□□ -0.93
COL28A1-203ENST00000435823 SMIM30A4D0T7 59 aa9.22□□□□□ -0.93
COL28A1-203ENST00000435823 METTL21EPA6NDL7 271 aa9.22□□□□□ -0.93
COL28A1-203ENST00000435823 A6NDX4 124 aa9.22□□□□□ -0.93
COL28A1-203ENST00000435823 LY6LH3BQJ8 138 aa9.22□□□□□ -0.93
COL28A1-203ENST00000435823 TSPAN9O75954 239 aa9.22□□□□□ -0.93
COL28A1-203ENST00000435823 LOXL3P58215 753 aa9.22□□□□□ -0.93
COL28A1-203ENST00000435823 MRPS15P82914 257 aaKnown RBP9.22□□□□□ -0.93
COL28A1-203ENST00000435823 UTF1Q5T230 341 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms