RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 METTL11BQ5VVY1 283 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 OR52W1Q6IF63 320 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 LYSMD2Q8IV50 215 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 Q8N402 240 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 Q8N7P7 452 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 OR4A4PQ8NGN8 299 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 RFESDQ8TAC1 157 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 MAFIPQ8WZ33 124 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 GALMQ96C23 342 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 WDR12Q9GZL7 423 aaKnown RBP10.11□□□□□ -0.79
LINC00339-204ENST00000434233 SIRPDQ9H106 197 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 UNKLQ9H9P5 680 aaKnown RBP10.11□□□□□ -0.79
LINC00339-204ENST00000434233 TAS2R8Q9NYW2 309 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 ONECUT1Q9UBC0 465 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 ZNF107Q9UII5 783 aaPredicted RBP10.11□□□□□ -0.79
LINC00339-204ENST00000434233 ANXA10Q9UJ72 324 aa10.11□□□□□ -0.79
LINC00339-204ENST00000434233 RBMX2Q9Y388 322 aaKnown RBP10.11□□□□□ -0.79
LINC00339-204ENST00000434233 CCDC168Q8NDH2 2452 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 IGKV1D-8A0A087WSZ0 117 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 FABP7O15540 132 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 MMP23AO75900 390 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 TOX4O94842 621 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 IGHV1-8P0DP01 117 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 MMP9P14780 707 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 FPR2P25090 351 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 SSTR5P35346 364 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 ERVFRD-1P60508 538 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 FAHD2BQ6P2I3 314 aaPredicted RBP10.1□□□□□ -0.79
LINC00339-204ENST00000434233 C5orf24Q7Z6I8 188 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 TMEM229BQ8NBD8 167 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 OR1L1Q8NH94 360 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 FAHD2AQ96GK7 314 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 SDHCQ99643 169 aaPredicted RBP10.1□□□□□ -0.79
LINC00339-204ENST00000434233 METTL8Q9H825 291 aaKnown RBP10.1□□□□□ -0.79
LINC00339-204ENST00000434233 AUP1Q9Y679 476 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 SESN1Q9Y6P5 492 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 VPS13CQ709C8 3753 aa10.1□□□□□ -0.79
LINC00339-204ENST00000434233 ABCA2Q9BZC7 2435 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 CSMD1Q96PZ7 3565 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 NOTCH2Q04721 2471 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 ZNF16P17020 682 aaPredicted RBP10.09□□□□□ -0.79
LINC00339-204ENST00000434233 OMGP23515 440 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 GDNFP39905 211 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 LOXL3P58215 753 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 Q3ZCU0 254 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 CHRFAM7AQ494W8 412 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 RNASE12Q5GAN4 147 aaKnown RBP10.09□□□□□ -0.79
LINC00339-204ENST00000434233 LY6G6FQ5SQ64 297 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 STEAP3Q658P3 488 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 PRR18Q8N4B5 295 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 OR5AP2Q8NGF4 316 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 SNAPC3Q92966 411 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 KIRREL1Q96J84 757 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 TSC22D3Q99576 134 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 CABLES2Q9BTV7 478 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 CCDC32Q9BV29 185 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 TMPRSS13Q9BYE2 586 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 TOLLIPQ9H0E2 274 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 C7orf69Q9H7B7 122 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 HEXA-AS1Q9H8Q6 139 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 OR2S2Q9NQN1 319 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 WNK2Q9Y3S1 2297 aa10.09□□□□□ -0.79
LINC00339-204ENST00000434233 MYO9AB2RTY4 2548 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 A0A087X0M5 115 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 TRBV6-7A0A0A0MS04 114 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 IGKV1-6A0A0C4DH72 117 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 A0A1B0GX30 115 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 SDCBPO00560 298 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-204ENST00000434233 LANCL1O43813 399 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 YPEL1O60688 119 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 CSF1P09603 554 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 ZBTB25P24278 435 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 CD34P28906 385 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 OR3A3P47888 321 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 TAS2R46P59540 309 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 TAS2R19P59542 299 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 ARPC4P59998 168 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 KRTAP1-1Q07627 177 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 HERPUD1Q15011 391 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 BAK1Q16611 211 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 MORN2Q502X0 79 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 IGSF11Q5DX21 431 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 PRAMEF5Q5TYX0 476 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 VMO1Q7Z5L0 202 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 OR13D1Q8NGV5 346 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 UBALD1Q8TB05 177 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 TNFRSF14Q92956 283 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 UPRTQ96BW1 309 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 YPEL2Q96QA6 119 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 TBX15Q96SF7 602 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 TMEM133Q9H2Q1 129 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 NECAP2Q9NVZ3 263 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 GFOD1Q9NXC2 390 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 JPT1Q9UK76 154 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 KCNS2Q9ULS6 477 aa10.08□□□□□ -0.8
LINC00339-204ENST00000434233 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.08□□□□□ -0.8
LINC00339-204ENST00000434233 ABCA1O95477 2261 aa10.07□□□□□ -0.8
LINC00339-204ENST00000434233 ANKRD20A5PA0PJZ0 165 aa10.07□□□□□ -0.8
LINC00339-204ENST00000434233 ZNF736B4DX44 427 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-204ENST00000434233 RGS11O94810 467 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms