RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 HES3Q5TGS1 186 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 RPL7L1Q6DKI1 246 aaKnown RBP6.33□□□□□ -1.4
COL17A1-204ENST00000433822 CTRB2Q6GPI1 263 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 FAM122CQ6P4D5 195 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 INO80CQ6PI98 192 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-204ENST00000433822 Q6ZPA2 131 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 PIP4P1Q86T03 277 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 CMTM1Q8IZ96 169 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 TOMM40LQ969M1 308 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 TSNAXQ99598 290 aaKnown RBP6.33□□□□□ -1.4
COL17A1-204ENST00000433822 MICU1Q9BPX6 476 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 FGF23Q9GZV9 251 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-204ENST00000433822 SLC25A31Q9H0C2 315 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 OR51I2Q9H344 312 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 CALHM2Q9HA72 323 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 SEBOXQ9HB31 216 aaPredicted RBP6.33□□□□□ -1.4
COL17A1-204ENST00000433822 OBP2BQ9NPH6 170 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 UQCC1Q9NVA1 299 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 MTCH1Q9NZJ7 389 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 GSKIPQ9P0R6 139 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 CLCF1Q9UBD9 225 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 NDRG3Q9UGV2 375 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 POLDIP2Q9Y2S7 368 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 KNTC1P50748 2209 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 FREM1Q5H8C1 2179 aa6.33□□□□□ -1.4
COL17A1-204ENST00000433822 AHCTF1Q8WYP5 2266 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 BTBD17A6NE02 478 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 SLC22A20A6NK97 555 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 IQCF6A8MYZ5 107 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF732B4DXR9 585 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 TOR1AO14656 332 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 PHF1O43189 567 aaPredicted RBP6.32□□□□□ -1.4
COL17A1-204ENST00000433822 PITX3O75364 302 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 TNFSF15O95150 251 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 HLA-HP01893 362 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 DANCRP0C864 163 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 BCL3P20749 454 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 NPBWR2P48146 333 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 GPM6AP51674 278 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 ERVK11-1P61568 191 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 HLA-DRB3P79483 266 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 FLI1Q01543 452 aaPredicted RBP6.32□□□□□ -1.4
COL17A1-204ENST00000433822 PAX5Q02548 391 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 TBC1D28Q2M2D7 210 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 NMSQ5H8A3 153 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF766Q5HY98 468 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 DMRTC1Q5HYR2 192 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 SPIN3Q5JUX0 258 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 PCSK4Q6UW60 755 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 LYZL2Q7Z4W2 148 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 FAM58AQ8N1B3 248 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 FAM169BQ8N8A8 192 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF565Q8N9K5 539 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 BHLHE23Q8NDY6 225 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 DMBX1Q8NFW5 382 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 MRPL30Q8TCC3 161 aaKnown RBP6.32□□□□□ -1.4
COL17A1-204ENST00000433822 LSM10Q969L4 123 aaKnown RBP6.32□□□□□ -1.4
COL17A1-204ENST00000433822 AKR1E2Q96JD6 320 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 NRIP2Q9BQI9 281 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 RTL8AQ9BWD3 113 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 TOLLIPQ9H0E2 274 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF552Q9H707 407 aaPredicted RBP6.32□□□□□ -1.4
COL17A1-204ENST00000433822 PLEKHF2Q9H8W4 249 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 LUZP4Q9P127 313 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 KPTNQ9Y664 436 aa6.32□□□□□ -1.4
COL17A1-204ENST00000433822 CNTRLQ7Z7A1 2325 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 A0A1B0GU03 582 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 A0A1B0GWJ7 208 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 FAM166BA8MTA8 275 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.31□□□□□ -1.4
COL17A1-204ENST00000433822 AQP7O14520 342 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 PLATP00750 562 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 CEACAM1P13688 526 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF14P17017 642 aaPredicted RBP6.31□□□□□ -1.4
COL17A1-204ENST00000433822 ADCYAP1P18509 176 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 COX5AP20674 150 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 EIF2S3P41091 472 aaKnown RBP6.31□□□□□ -1.4
COL17A1-204ENST00000433822 WNT5AP41221 380 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 LPAR6P43657 344 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 NKX2-1P43699 371 aaPredicted RBP6.31□□□□□ -1.4
COL17A1-204ENST00000433822 TNFSF10P50591 281 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 FXYD4P59646 89 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 SRYQ05066 204 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 SRSF1Q07955 248 aaKnown RBP eCLIP6.31□□□□□ -1.4
COL17A1-204ENST00000433822 HERPUD1Q15011 391 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF146Q15072 292 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 ACSF3Q4G176 576 aaPredicted RBP6.31□□□□□ -1.4
COL17A1-204ENST00000433822 OR2A2Q6IF42 318 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 DPPA3Q6W0C5 159 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 H1FOOQ8IZA3 346 aaPredicted RBP6.31□□□□□ -1.4
COL17A1-204ENST00000433822 PUSL1Q8N0Z8 303 aaKnown RBP6.31□□□□□ -1.4
COL17A1-204ENST00000433822 ZNF843Q8N446 348 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 C17orf78Q8N4C9 275 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 OR2C3Q8N628 320 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 TCTEX1D1Q8N7M0 179 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 SLC35G3Q8N808 338 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 ZBTB34Q8NCN2 500 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 SLAMF9Q96A28 289 aa6.31□□□□□ -1.4
COL17A1-204ENST00000433822 CYYR1Q96J86 154 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms