RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 BCL2L2Q92843 193 aaPredicted RBP11.62□□□□□ -0.55
COL6A3-207ENST00000433762 MUCL1Q96DR8 90 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 RTL8AQ9BWD3 113 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 IL36RNQ9UBH0 155 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 PCP4L1A6NKN8 68 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 RNF212BA8MTL3 300 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 C9orf172C9J069 976 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 AP4M1O00189 453 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 WNT5AP41221 380 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 AKR1C3P42330 323 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 MAGEA5P43359 124 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 SERF2P84101 59 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 AKIRIN2Q53H80 203 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 DCAF10Q5QP82 559 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 TMEM164Q5U3C3 297 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 ZBTB34Q8NCN2 500 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 MBD3L1Q8WWY6 194 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 MAGT1Q9H0U3 335 aa11.62□□□□□ -0.55
COL6A3-207ENST00000433762 H3BQ15 152 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 KLRC4-KLRK1H3BQV0 150 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 CST7O76096 145 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 CELA3AP09093 270 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 OMGP23515 440 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 ERVK11-1P61568 191 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 PNRC1Q12796 327 aaPredicted RBP11.61□□□□□ -0.55
COL6A3-207ENST00000433762 CDCP2Q5VXM1 449 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 ZNF497Q6ZNH5 498 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 MDS2Q8NDY4 140 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 TCTEX1D2Q8WW35 142 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 TVP23CQ96ET8 276 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 RARRES2Q99969 163 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 MBNL3Q9NUK0 354 aaKnown RBP11.61□□□□□ -0.55
COL6A3-207ENST00000433762 WIPI2Q9Y4P8 454 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 GPR37O15354 613 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 PPIHO43447 177 aaKnown RBP11.61□□□□□ -0.55
COL6A3-207ENST00000433762 SP9P0CG40 484 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 FOXG1P55316 489 aaPredicted RBP11.61□□□□□ -0.55
COL6A3-207ENST00000433762 HBG1P69891 147 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 HBG2P69892 147 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 CCL20P78556 96 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 PLGLB1Q02325 96 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 GABRA6Q16445 453 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 FBXW9Q5XUX1 488 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 C20orf204Q6ZNR8 217 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 FAM24BQ8N5W8 94 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 P2RX4Q99571 388 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 TMEM242Q9NWH2 141 aa11.61□□□□□ -0.55
COL6A3-207ENST00000433762 LOC102723971A0A1B0GUV8 181 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 A0A1W2PPE2 198 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 CDRT15L2A8MXV6 281 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 TGOLN2O43493 480 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 SYNGR2O43760 224 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 SP1P08047 785 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 CCL2P13500 99 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 ASCL1P50553 236 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 ZNF154Q13106 437 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 MRPL49Q13405 166 aaKnown RBP11.6□□□□□ -0.55
COL6A3-207ENST00000433762 ZNF146Q15072 292 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 ZNF295-AS1Q8N0V1 137 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 ISOC2Q96AB3 205 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 PINX1Q96BK5 328 aaKnown RBP11.6□□□□□ -0.55
COL6A3-207ENST00000433762 NIPSNAP3BQ9BS92 247 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 TOLLIPQ9H0E2 274 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 CISD1Q9NZ45 108 aaKnown RBP11.6□□□□□ -0.55
COL6A3-207ENST00000433762 ERRFI1Q9UJM3 462 aaPredicted RBP11.6□□□□□ -0.55
COL6A3-207ENST00000433762 EPHA1P21709 976 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 TESK1Q15569 626 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 TBC1D28Q2M2D7 210 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 C9orf135Q5VTT2 229 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 OR13D1Q8NGV5 346 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 TCEAL3Q969E4 200 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 RAB39BQ96DA2 213 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 C20orf24Q9BUV8 137 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 TIMM9Q9Y5J7 89 aa11.6□□□□□ -0.55
COL6A3-207ENST00000433762 PUS1Q9Y606 427 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL6A3-207ENST00000433762 TMEM210A6NLX4 147 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 FAM166BA8MTA8 275 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 IL18BPO95998 194 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 PSG2P11465 335 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 SELEP16581 610 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 UBE2KP61086 200 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 FABP9Q0Z7S8 132 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 BATF2Q8N1L9 274 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 TCTEX1D1Q8N7M0 179 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 SCGB1C1Q8TD33 95 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 RDH5Q92781 318 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 FER1L6-AS2Q96M78 137 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 ABHD14AQ9BUJ0 271 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 LIPGQ9Y5X9 500 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 CNTRLQ7Z7A1 2325 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 A0A0G2JRQ6 117 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 hCG_1809904A0A1W2PP81 198 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 A0A1W2PR64 198 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 A0A1W2PRV1 198 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 IGLV2-14P01704 120 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 EIF2S3P41091 472 aaKnown RBP11.59□□□□□ -0.55
COL6A3-207ENST00000433762 MEOX1P50221 254 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 TMEM217Q8N7C4 229 aa11.59□□□□□ -0.55
COL6A3-207ENST00000433762 TMPRSS5Q9H3S3 457 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms