RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 TMPRSS3P57727 454 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 AARDQ4LEZ3 155 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 CBLN3Q6UW01 205 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 TMEM130Q8N3G9 435 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 LHX4Q969G2 390 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 MAP1LC3B2A6NCE7 125 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 GCGP01275 180 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 SFTA3P0C7M3 94 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 CLEC2LP0C7M8 214 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 TIMP3P35625 211 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 NPBWR1P48145 328 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 PRRX1P54821 245 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 UBE2KP61086 200 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 DEFB110Q30KQ9 67 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 ZNF343Q6P1L6 599 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 MMD2Q8IY49 270 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 C10orf111Q8N326 155 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 ZNF808Q8N4W9 903 aaPredicted RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 OR2Z1Q8NG97 314 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 TMEM186Q96B77 213 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 TVP23CQ96ET8 276 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 AGMATQ9BSE5 352 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 MAP1LC3BQ9GZQ8 125 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 TLNRD1Q9H1K6 362 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 RBKSQ9H477 322 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 TRAV30A0A087WSZ9 112 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 MDFIC2A0A1B0GVS7 189 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 MMP23AO75900 390 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 FGF7P21781 194 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 CD1BP29016 333 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 LTBRP36941 435 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 CLDN18P56856 261 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 MBNL2Q5VZF2 373 aaKnown RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 DGAT2L6Q6ZPD8 337 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 POC1AQ8NBT0 407 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 ZNF596Q8TC21 504 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 VOPP1Q96AW1 172 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 WDR89Q96FK6 387 aaPredicted RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 KCNS1Q96KK3 526 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 SMIM7Q9BQ49 75 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 YTHDF2Q9Y5A9 579 aaKnown RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 IGHG3P01860 377 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 LIPFP07098 398 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 FOLR1P15328 257 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 HAAOP46952 286 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 CNN1P51911 297 aaKnown RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 PGGT1BP53609 377 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 GFRA1P56159 465 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 ERHP84090 104 aaKnown RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 ZNF506Q5JVG8 444 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 RGS7BPQ6MZT1 257 aaPredicted RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 SHISA6Q6ZSJ9 500 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 Q8N9G6 341 aaPredicted RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 OR10G8Q8NGN5 311 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 SMIM14Q96QK8 99 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 SSUH2Q9Y2M2 353 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 KCNE3Q9Y6H6 103 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 TRGV8A0A0C4DH27 118 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 RAB29O14966 203 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 PHF1O43189 567 aaPredicted RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 CSN1S1P47710 185 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 NANOS3P60323 173 aaKnown RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 C14orf79Q96F83 325 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 WDR61Q9GZS3 305 aaKnown RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 SYNPO2LQ9H987 977 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 BARX1Q9HBU1 254 aaPredicted RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 DKK4Q9UBT3 224 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 OR14J1Q9UGF5 321 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 CLDN16Q9Y5I7 305 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 LINC00312Q9Y6C7 94 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 FCGR3AP08637 254 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 OTX2P32243 289 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 SRSF2Q01130 221 aaKnown RBP3.26□□□□□ -1.89
SHPRH-205ENST00000433355 ATP5L2Q7Z4Y8 100 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 LURAP1Q96LR2 239 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 PCNX3Q9H6A9 2034 aa3.26□□□□□ -1.89
SHPRH-205ENST00000433355 OTOL1A6NHN0 477 aaPredicted RBP3.25□□□□□ -1.89
SHPRH-205ENST00000433355 B9A039 149 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 J3QR89 54 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 FAHP16930 419 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 ZNF260Q3ZCT1 412 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 ZNF585BQ52M93 769 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 CDCP2Q5VXM1 449 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 CLEC18BQ6UXF7 455 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 COX15Q7KZN9 410 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 SMIM15Q7Z3B0 74 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 RGP1Q92546 391 aaPredicted RBP3.25□□□□□ -1.89
SHPRH-205ENST00000433355 ISG20L2Q9H9L3 353 aaKnown RBP3.25□□□□□ -1.89
SHPRH-205ENST00000433355 CFAP46Q8IYW2 2715 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 C3orf85A0A1B0GTC6 90 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 M0QYG6 137 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 NNATQ16517 81 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 DLK2Q6UY11 383 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 PPP1R32Q7Z5V6 425 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 C2orf73Q8N5S3 287 aaPredicted RBP3.25□□□□□ -1.89
SHPRH-205ENST00000433355 RNASEH2CQ8TDP1 164 aaKnown RBP3.25□□□□□ -1.89
SHPRH-205ENST00000433355 GRAMD2BQ96HH9 432 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 JSRP1Q96MG2 331 aaPredicted RBP3.25□□□□□ -1.89
SHPRH-205ENST00000433355 TMEM231Q9H6L2 316 aa3.25□□□□□ -1.89
SHPRH-205ENST00000433355 CNTD2Q9H8S5 307 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms