RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 ZNF485Q8NCK3 441 aa7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 TMEM104Q8NE00 496 aa7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 OR51D1Q8NGF3 324 aa7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 OR13C5Q8NGS8 318 aa7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 ST6GALNAC6Q969X2 333 aa7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 GPR61Q9BZJ8 451 aa7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 METTL9Q9H1A3 318 aa7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 PAK1IP1Q9NWT1 392 aaPredicted RBP7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 BABAM2Q9NXR7 383 aa7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SMPD3Q9NY59 655 aaPredicted RBP7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 RCC2Q9P258 522 aaKnown RBP7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 DIMT1Q9UNQ2 313 aaKnown RBP7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 RYR3Q15413 4870 aa7.42□□□□□ -1.22
CDC42-IT1-201ENST00000431803 A0A1W2PP11 408 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SERPINE3A8MV23 424 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SDCBPO00560 298 aaPredicted RBP7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 ORC5O43913 435 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 GPX5O75715 221 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 MT-ND4P03905 459 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 CSTBP04080 98 aaKnown RBP7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 GAPDHP04406 335 aaKnown RBP7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SERPINA2P20848 420 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 HOXD3P31249 432 aaPredicted RBP7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 REG1BP48304 166 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 RPS11P62280 158 aaKnown RBP eCLIP7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 RIPK1Q13546 671 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 Q3ZCU0 254 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SLC22A6Q4U2R8 563 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 DMKNQ6E0U4 476 aaPredicted RBP7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 FAM53AQ6NSI3 398 aaPredicted RBP7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 C18orf65Q6ZTR6 163 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SLC35E3Q7Z769 313 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 TGIF2LXQ8IUE1 241 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 STPG2Q8N412 459 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 COMMD1Q8N668 190 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 RTN4IP1Q8WWV3 396 aaPredicted RBP7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 GHSRQ92847 366 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 ARL11Q969Q4 196 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 ORAI1Q96D31 301 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 EAF1Q96JC9 268 aaPredicted RBP7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 PGLYRP3Q96LB9 341 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 P2RX4Q99571 388 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 ZNF184Q99676 751 aaPredicted RBP7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 ZFP57Q9NU63 452 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 GFOD1Q9NXC2 390 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 CLEC2DQ9UHP7 191 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 ING4Q9UNL4 249 aa7.41□□□□□ -1.22
CDC42-IT1-201ENST00000431803 TRAV8-7A0A075B6U6 113 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 TRBV5-7A0A0A0MS05 114 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 IGHV3-72A0A0B4J1Y9 119 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 IRGMA1A4Y4 181 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 LINC01548A6NM66 108 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 C12orf77C9JDV5 145 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 AP4M1O00189 453 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 GTF2F2P13984 249 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 MYL12AP19105 171 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 MYCNOSP40205 109 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 GPR12P47775 334 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 ZNF137PP52743 207 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SLC35B1P78383 322 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 GPR176Q14439 515 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 Q499Y3 187 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 YIF1BQ5BJH7 314 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 VAX1Q5SQQ9 334 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 LCE3BQ5TA77 95 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SLC25A48Q6ZT89 311 aaKnown RBP7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 MOB3BQ86TA1 216 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 FOXRED2Q8IWF2 684 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 GAPTQ8N292 157 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 MFSD4AQ8N468 514 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 RNF152Q8N8N0 203 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 Q8N9W7 124 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 ZNF439Q8NDP4 499 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 KLHL30-AS1Q8NEE0 82 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 ZNF555Q8NEP9 628 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 OR2T10Q8NGZ9 312 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 UBALD1Q8TB05 177 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 MRPS24Q96EL2 167 aaKnown RBP7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 S100A13Q99584 98 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 MCRIP2Q9BUT9 160 aaKnown RBP7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 ABCG5Q9H222 651 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 SPACA1Q9HBV2 294 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 PLSCR3Q9NRY6 295 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 LIN7CQ9NUP9 197 aaKnown RBP7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 CKLFQ9UBR5 152 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 LINC00527Q9UJ94 153 aa7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 EXOSC1Q9Y3B2 195 aaKnown RBP7.4□□□□□ -1.22
CDC42-IT1-201ENST00000431803 NCBP2LA6PVI3 153 aaKnown RBP7.39□□□□□ -1.23
CDC42-IT1-201ENST00000431803 H0YHG0 523 aa7.39□□□□□ -1.23
CDC42-IT1-201ENST00000431803 AIPO00170 330 aa7.39□□□□□ -1.23
CDC42-IT1-201ENST00000431803 SLC31A2O15432 143 aa7.39□□□□□ -1.23
CDC42-IT1-201ENST00000431803 MOSP00540 346 aa7.39□□□□□ -1.23
CDC42-IT1-201ENST00000431803 IL3RAP26951 378 aa7.39□□□□□ -1.23
CDC42-IT1-201ENST00000431803 CD1BP29016 333 aa7.39□□□□□ -1.23
CDC42-IT1-201ENST00000431803 CFHR3Q02985 330 aa7.39□□□□□ -1.23
CDC42-IT1-201ENST00000431803 TMEM30BQ3MIR4 351 aa7.39□□□□□ -1.23
CDC42-IT1-201ENST00000431803 ATAD3CQ5T2N8 411 aa7.39□□□□□ -1.23
CDC42-IT1-201ENST00000431803 C11orf87Q6NUJ2 197 aa7.39□□□□□ -1.23
CDC42-IT1-201ENST00000431803 TEX38Q6PEX7 206 aa7.39□□□□□ -1.23
CDC42-IT1-201ENST00000431803 LYPD6Q86Y78 171 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms