RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 CGB7P0DN87 165 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 IGHV3-30-3P0DP02 117 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 ZNF3P17036 446 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 PSMA1P25786 263 aaKnown RBP0.9□□□□□ -2.27
CDC40-204ENST00000431461 MAGEA3P43357 314 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 LPAR6P43657 344 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 GABARAPL2P60520 117 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 RAB8AP61006 207 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 RAB2AP61019 212 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 SLC35A2P78381 396 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 ZNF117Q03924 483 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 XRCC4Q13426 336 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 PDK2Q15119 407 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 ANGPT1Q15389 498 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 NIPAL1Q6NVV3 410 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 CLEC20AQ6ZU45 233 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 COPS6Q7L5N1 327 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 MUC15Q8N387 334 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 C2orf73Q8N5S3 287 aaPredicted RBP0.9□□□□□ -2.27
CDC40-204ENST00000431461 CDRT4Q8N9R6 151 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 OR52E4Q8NGH9 312 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 LHFPL5Q8TAF8 219 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 TMBIM1Q969X1 311 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 PGLYRP3Q96LB9 341 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 SERPINB11Q96P15 392 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 AICDAQ9GZX7 198 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 ALX4Q9H161 411 aaPredicted RBP0.9□□□□□ -2.27
CDC40-204ENST00000431461 ZNF286AQ9HBT8 521 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 NXT1Q9UKK6 140 aaKnown RBP0.9□□□□□ -2.27
CDC40-204ENST00000431461 BTRCQ9Y297 605 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 SNX24Q9Y343 169 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 TBL2Q9Y4P3 447 aaKnown RBP0.9□□□□□ -2.27
CDC40-204ENST00000431461 HSPE1-MOB4S4R3N1 261 aa0.9□□□□□ -2.27
CDC40-204ENST00000431461 RAB3GAP2Q9H2M9 1393 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 GOLGA8QA0A0J9YX86 632 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 TMEM213A2RRL7 107 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 TMEM235A6NFC5 223 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 SDHAF1A6NFY7 115 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 F8VZ95 297 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 UBFD1O14562 309 aaKnown RBP0.89□□□□□ -2.27
CDC40-204ENST00000431461 LECT2O14960 151 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 STK16O75716 305 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 IFI30P13284 250 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 M6PRP20645 277 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 CFL1P23528 166 aaKnown RBP0.89□□□□□ -2.27
CDC40-204ENST00000431461 F8A1P23610 371 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 GADD45AP24522 165 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 S100A2P29034 98 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 BLVRBP30043 206 aaPredicted RBP0.89□□□□□ -2.27
CDC40-204ENST00000431461 AGTR1P30556 359 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 EVI2BP34910 448 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 CRATP43155 626 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 RWDD2BP57060 319 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 UBE2KP61086 200 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 PSG4Q00888 419 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 STX3Q13277 289 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 APOFQ13790 326 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 ZNF181Q2M3W8 571 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 ELP2Q6IA86 826 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 TCAIMQ8N3R3 496 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 ZFAND2AQ8N6M9 145 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 NATD1Q8N6N6 113 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 ATP6V1C2Q8NEY4 427 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 OR10D4PQ8NGN7 298 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 OR9I1Q8NGQ6 314 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 OR2AE1Q8NHA4 323 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 MAL2Q969L2 176 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 FXYD5Q96DB9 178 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 MRPS24Q96EL2 167 aaKnown RBP0.89□□□□□ -2.27
CDC40-204ENST00000431461 OR51E2Q9H255 320 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 C11orf49Q9H6J7 331 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 IFT46Q9NQC8 304 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 AGPAT3Q9NRZ7 376 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 NDUFB11Q9NX14 153 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 MS4A12Q9NXJ0 267 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 TAS2R9Q9NYW1 312 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 GLS2Q9UI32 602 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 HEY1Q9Y5J3 304 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 SNX10Q9Y5X0 201 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 PUS1Q9Y606 427 aaKnown RBP eCLIP0.89□□□□□ -2.27
CDC40-204ENST00000431461 URGCP-MRPS24S4R325 110 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 PCNX2A6NKB5 2137 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 NUP205Q92621 2012 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 PTPRJQ12913 1337 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 CACNA1DQ01668 2161 aa0.89□□□□□ -2.27
CDC40-204ENST00000431461 YLPM1P49750 1951 aaKnown RBP0.88□□□□□ -2.27
CDC40-204ENST00000431461 LOC102725191A0A1B0GVB3 256 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 C17orf98A8MV24 154 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 HSBP1L1C9JCN9 74 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 F8W036 122 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 K7EQS6 105 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 M0QYV0 167 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 SULT1C2O00338 296 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 SGCEO43556 437 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 STX10O60499 249 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 IGKV1-16P04430 117 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 CD7P09564 240 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 LIMS3P0CW19 117 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 LIMS4P0CW20 117 aa0.88□□□□□ -2.27
CDC40-204ENST00000431461 CPMP14384 443 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms