RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 OR5AP2Q8NGF4 316 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 IGKV3D-15A0A087WSY6 115 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 H7BYZ3 331 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 SCARB1Q8WTV0 552 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 CORO2AQ92828 525 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 HEXA-AS1Q9H8Q6 139 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 PCM1Q15154 2024 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 A0A0G2JNJ9 132 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 NPIPB7O75200 414 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 NQO2P16083 231 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 RNFT1Q5M7Z0 435 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 ADGRG7Q96K78 797 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 HES4Q9HCC6 221 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 Q9UFV3 132 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 PSG11Q9UQ72 335 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 RFPL4AA6NLU0 287 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 RFPL4AL1F8VTS6 287 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 KCNMB1Q16558 191 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 TMEM65Q6PI78 240 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 TEX29Q8N6K0 151 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 FAM206AQ9NX38 181 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 AHCTF1Q8WYP5 2266 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 RPL13AP40429 203 aaKnown RBP11.13□□□□□ -0.63
PTCH1-207ENST00000429896 TCTAP57738 103 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 NANOS3P60323 173 aaKnown RBP11.13□□□□□ -0.63
PTCH1-207ENST00000429896 TCTE3Q8IZS6 198 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 FAM222BQ8WU58 562 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 HSD17B10Q99714 261 aaKnown RBP11.13□□□□□ -0.63
PTCH1-207ENST00000429896 NIT2Q9NQR4 276 aa11.13□□□□□ -0.63
PTCH1-207ENST00000429896 ST8SIA5O15466 376 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 LY86O95711 162 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 CD1AP06126 327 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 OR4E1P0C645 316 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 SSBP1Q04837 148 aaKnown RBP11.12□□□□□ -0.63
PTCH1-207ENST00000429896 SMIM7Q9BQ49 75 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 KCNK15Q9H427 330 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 MYLKQ15746 1914 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 IGHV1-69-2A0A0G2JMI3 117 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 MBD3L4A6NDZ8 208 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-207ENST00000429896 MBD3L3A6NE82 208 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-207ENST00000429896 MBD3L5A6NJ08 208 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-207ENST00000429896 B3GALT5-AS1P59052 145 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 LINC01590Q5TEZ4 76 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 ZNF788Q6ZQV5 615 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 LRP11Q86VZ4 500 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 MBD3L2Q8NHZ7 208 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-207ENST00000429896 STARD4Q96DR4 205 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 KPTNQ9Y664 436 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 IL5P05113 134 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-207ENST00000429896 PRR13Q9NZ81 148 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 CNTRLQ7Z7A1 2325 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 IGKV1D-43A0A0B4J1Z2 117 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 OR1A1Q9P1Q5 309 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 PRDX2P32119 198 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 CEBPDP49716 269 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-207ENST00000429896 OR2F1Q13607 317 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 TIGITQ495A1 244 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 PECRQ9BY49 303 aa11.12□□□□□ -0.63
PTCH1-207ENST00000429896 SEC16AO15027 2179 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 DUS4LO95620 317 aaKnown RBP11.11□□□□□ -0.63
PTCH1-207ENST00000429896 GABRB1P18505 474 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 COL10A1Q03692 680 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 MPV17LQ2QL34 196 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 SSC4DQ8WTU2 575 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 GAR1Q9NY12 217 aaKnown RBP11.11□□□□□ -0.63
PTCH1-207ENST00000429896 BMPR1BO00238 502 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 GEMIN2O14893 280 aaKnown RBP11.11□□□□□ -0.63
PTCH1-207ENST00000429896 SLC25A5P05141 298 aaKnown RBP11.11□□□□□ -0.63
PTCH1-207ENST00000429896 WT1P19544 449 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-207ENST00000429896 OR3A1P47881 315 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 RNASEKQ6P5S7 137 aaKnown RBP11.11□□□□□ -0.63
PTCH1-207ENST00000429896 POM121L2Q96KW2 1035 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 OOEPA6NGQ2 149 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 CBY3A6NI87 242 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 J3QKU1 62 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 ICMTO60725 284 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 Q3ZCU0 254 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 SMUG1Q53HV7 270 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 NEU4Q8WWR8 484 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-207ENST00000429896 PERPQ96FX8 193 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 BTF3L4Q96K17 158 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 CCL13Q99616 98 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 IGHV3-21A0A0B4J1V1 117 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 NDUFA2O43678 99 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 MMP15P51511 669 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 COMMD1Q8N668 190 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 ZNF837Q96EG3 531 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-207ENST00000429896 VPS25Q9BRG1 176 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 INHBBP09529 407 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 FGF8P55075 233 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-207ENST00000429896 UFC1Q9Y3C8 167 aa11.11□□□□□ -0.63
PTCH1-207ENST00000429896 CTAG2O75638 210 aa11.1□□□□□ -0.63
PTCH1-207ENST00000429896 ORM2P19652 201 aa11.1□□□□□ -0.63
PTCH1-207ENST00000429896 KIR2DL2P43627 348 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-207ENST00000429896 TPPP2P59282 170 aa11.1□□□□□ -0.63
PTCH1-207ENST00000429896 LYZP61626 148 aa11.1□□□□□ -0.63
PTCH1-207ENST00000429896 SUMO1P63165 101 aaKnown RBP11.1□□□□□ -0.63
PTCH1-207ENST00000429896 VAMP3Q15836 100 aa11.1□□□□□ -0.63
PTCH1-207ENST00000429896 LURAP1Q96LR2 239 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms