RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 NMSQ5H8A3 153 aa8.13□□□□□ -1.11
NEDD1-203ENST00000429527 ZNF880Q6PDB4 577 aa8.13□□□□□ -1.11
NEDD1-203ENST00000429527 PRSS57Q6UWY2 283 aa8.13□□□□□ -1.11
NEDD1-203ENST00000429527 SLC35E3Q7Z769 313 aa8.13□□□□□ -1.11
NEDD1-203ENST00000429527 LGI3Q8N145 548 aa8.13□□□□□ -1.11
NEDD1-203ENST00000429527 FBXL14Q8N1E6 418 aa8.13□□□□□ -1.11
NEDD1-203ENST00000429527 PLPPR1Q8TBJ4 325 aa8.13□□□□□ -1.11
NEDD1-203ENST00000429527 S100A13Q99584 98 aa8.13□□□□□ -1.11
NEDD1-203ENST00000429527 ZNF2Q9BSG1 426 aaPredicted RBP8.13□□□□□ -1.11
NEDD1-203ENST00000429527 LYRM2Q9NU23 88 aaPredicted RBP8.13□□□□□ -1.11
NEDD1-203ENST00000429527 FBN2P35556 2912 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 RER1O15258 196 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 CXCL13O43927 109 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 QDPRP09417 244 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 BMP5P22003 454 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 SULT1A1P50225 295 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 C20orf204Q6ZNR8 217 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 Q6ZT83 130 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 ZIC4Q8N9L1 334 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 SECTM1Q8WVN6 248 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 AKR1E2Q96JD6 320 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 REPIN1Q9BWE0 567 aaKnown RBP8.12□□□□□ -1.11
NEDD1-203ENST00000429527 BANF2Q9H503 90 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 ZNF729A6NN14 1252 aaPredicted RBP8.12□□□□□ -1.11
NEDD1-203ENST00000429527 TRDCB7Z8K6 153 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 C16orf97H3BN30 126 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 H3BSH0 61 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 HSD17B6O14756 317 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 FOSL1P15407 271 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 CDX1P47902 265 aaPredicted RBP8.12□□□□□ -1.11
NEDD1-203ENST00000429527 NPBWR2P48146 333 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 KRTAP10-9P60411 292 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 SNRPEP62304 92 aaKnown RBP8.12□□□□□ -1.11
NEDD1-203ENST00000429527 ID3Q02535 119 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 CNN3Q15417 329 aaKnown RBP8.12□□□□□ -1.11
NEDD1-203ENST00000429527 CXorf67Q86X51 503 aaPredicted RBP8.12□□□□□ -1.11
NEDD1-203ENST00000429527 PIGTQ969N2 578 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 TMEM222Q9H0R3 208 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 METTL9Q9H1A3 318 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 TMEM231Q9H6L2 316 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 KCNIP3Q9Y2W7 256 aa8.12□□□□□ -1.11
NEDD1-203ENST00000429527 IGKV1-27A0A075B6S5 117 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 LINC00587B1AMM8 73 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 CLN5O75503 358 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 TSPAN15O95858 294 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 NAPSAO96009 420 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 OR5H8P0DN80 308 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 ZNF266Q14584 549 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 LINC00596Q86U02 117 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 CCDC71LQ8N9Z2 235 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 OPA3Q9H6K4 179 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 AK3Q9UIJ7 227 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 ELOA3CA0A087WX78 387 aaPredicted RBP8.11□□□□□ -1.11
NEDD1-203ENST00000429527 C5orf63A6NC05 138 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 IFITM10A6NMD0 228 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 SIAH2O43255 324 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 FAM57BQ71RH2 274 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 ZNF610Q8N9Z0 462 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 SGK3Q96BR1 496 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 RBMXL1Q96E39 390 aaKnown RBP8.11□□□□□ -1.11
NEDD1-203ENST00000429527 AGMATQ9BSE5 352 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 OBP2BQ9NPH6 170 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 SLC2A9Q9NRM0 540 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 RNF115Q9Y4L5 304 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 ICE1Q9Y2F5 2266 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 hCG_38984A0A1B0GV85 526 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 A0A1W2PPE3 182 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 KIAA1324LA8MWY0 1029 aaPredicted RBP8.11□□□□□ -1.11
NEDD1-203ENST00000429527 SHISA8B8ZZ34 492 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 ST8SIA3O43173 380 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 SERPINA5P05154 406 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 SRP19P09132 144 aaKnown RBP8.11□□□□□ -1.11
NEDD1-203ENST00000429527 ZNF728P0DKX0 622 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 PHYHD1Q5SRE7 291 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 TREM2Q9NZC2 230 aa8.11□□□□□ -1.11
NEDD1-203ENST00000429527 PIGPP57054 158 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 SRYQ05066 204 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 ARFRP1Q13795 201 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 COA6Q5JTJ3 125 aaKnown RBP8.1□□□□□ -1.11
NEDD1-203ENST00000429527 KRTAP1-3Q8IUG1 177 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 BSCL2Q96G97 398 aaPredicted RBP8.1□□□□□ -1.11
NEDD1-203ENST00000429527 OPN3Q9H1Y3 402 aaPredicted RBP8.1□□□□□ -1.11
NEDD1-203ENST00000429527 LRRK2Q5S007 2527 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 EWSR1Q01844 656 aaKnown RBP eCLIP8.1□□□□□ -1.11
NEDD1-203ENST00000429527 KHDC3LQ587J8 217 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 TCTEX1D2Q8WW35 142 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 MBD3L1Q8WWY6 194 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 SPTSSAQ969W0 71 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 GNPNAT1Q96EK6 184 aaPredicted RBP8.1□□□□□ -1.11
NEDD1-203ENST00000429527 WFIKKN1Q96NZ8 548 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 PYGO2Q9BRQ0 406 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 TMUB1Q9BVT8 246 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 DHHO43323 396 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 IFNA17P01571 189 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 GAPTQ8N292 157 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 RTN4IP1Q8WWV3 396 aaPredicted RBP8.1□□□□□ -1.11
NEDD1-203ENST00000429527 PGAM5Q96HS1 289 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 CYYR1Q96J86 154 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 SSX3Q99909 188 aa8.1□□□□□ -1.11
NEDD1-203ENST00000429527 EMC6Q9BV81 110 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms