RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 PGA5P0DJD9 388 aa12.83□□□□□ -0.35
CACTIN-203ENST00000429344 CD200P41217 278 aa12.83□□□□□ -0.35
CACTIN-203ENST00000429344 LSM6P62312 80 aaKnown RBP12.83□□□□□ -0.35
CACTIN-203ENST00000429344 IGFBP7Q16270 282 aa12.83□□□□□ -0.35
CACTIN-203ENST00000429344 CCDC54Q8NEL0 328 aa12.83□□□□□ -0.35
CACTIN-203ENST00000429344 OR1F12Q8NHA8 337 aa12.83□□□□□ -0.35
CACTIN-203ENST00000429344 ZNF488Q96MN9 340 aa12.83□□□□□ -0.35
CACTIN-203ENST00000429344 FOXB1Q99853 325 aa12.83□□□□□ -0.35
CACTIN-203ENST00000429344 FAM173AQ9BQD7 235 aa12.83□□□□□ -0.35
CACTIN-203ENST00000429344 FREM1Q5H8C1 2179 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 A0A0U1RQV5 110 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 EDN3P14138 238 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 SELLP14151 372 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 HOXA5P20719 270 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 GPM6AP51674 278 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 SUCLG1P53597 346 aaKnown RBP12.83□□□□□ -0.36
CACTIN-203ENST00000429344 KHDC3LQ587J8 217 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 ZNF818PQ6ZRF7 136 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 RPUSD4Q96CM3 377 aaKnown RBP12.83□□□□□ -0.36
CACTIN-203ENST00000429344 SPIN2AQ99865 258 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 SPIN2BQ9BPZ2 258 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 ATG101Q9BSB4 218 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 A0A087X0M5 115 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 A0A1B0GX30 115 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 SRP19P09132 144 aaKnown RBP12.83□□□□□ -0.36
CACTIN-203ENST00000429344 TRGC1P0CF51 173 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 CD46P15529 392 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 ELOBQ15370 118 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 LRP11Q86VZ4 500 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 ADPRHL1Q8NDY3 354 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 SPSB1Q96BD6 273 aa12.83□□□□□ -0.36
CACTIN-203ENST00000429344 PINLYPA6NC86 204 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 CDX4O14627 284 aaPredicted RBP12.82□□□□□ -0.36
CACTIN-203ENST00000429344 RBMXL2O75526 392 aaKnown RBP12.82□□□□□ -0.36
CACTIN-203ENST00000429344 ZNF883P0CG24 379 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 TLE4Q04727 773 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 OR8G2PQ6IF36 304 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 CABLES2Q9BTV7 478 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 V9GYS6 101 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 PROB1E7EW31 1015 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 FUT3P21217 361 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 EIF3IQ13347 325 aaKnown RBP12.82□□□□□ -0.36
CACTIN-203ENST00000429344 OR2M7Q8NG81 312 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 HPSE2Q8WWQ2 592 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 FRZBQ92765 325 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 C18orf12Q96KH6 178 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 WFIKKN1Q96NZ8 548 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 SCRT1Q9BWW7 348 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 TUBA4BQ9H853 241 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 IGKV1D-13A0A0B4J2D9 117 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 SMCO3A2RU48 225 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 IFITM10A6NMD0 228 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 IGKV1-13P0DP09 117 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 ZNF787Q6DD87 383 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 FGFBP3Q8TAT2 258 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 HS3ST6Q96QI5 342 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 DDA1Q9BW61 102 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 PROK2Q9HC23 129 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 MED13Q9UHV7 2174 aa12.82□□□□□ -0.36
CACTIN-203ENST00000429344 FOXI3A8MTJ6 420 aaPredicted RBP12.81□□□□□ -0.36
CACTIN-203ENST00000429344 TRDCB7Z8K6 153 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 PPIHO43447 177 aaKnown RBP12.81□□□□□ -0.36
CACTIN-203ENST00000429344 GPX4P36969 197 aaPredicted RBP12.81□□□□□ -0.36
CACTIN-203ENST00000429344 HLA-DRB3P79483 266 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 MOB3AQ96BX8 217 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 GALNT14Q96FL9 552 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 GPR87Q9BY21 358 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 PPP1R3CQ9UQK1 317 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 TMEM50AO95807 157 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 BCL3P20749 454 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 IDH3GP51553 393 aaPredicted RBP12.81□□□□□ -0.36
CACTIN-203ENST00000429344 UNQ6494/PRO21346Q6UXR6 183 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 CBY1Q9Y3M2 126 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 DMRT1Q9Y5R6 373 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 ICAM4Q14773 271 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 SPANXN5Q5MJ07 72 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 ETFRF1Q6IPR1 90 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 SPSB3Q6PJ21 355 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 LHFPL2Q6ZUX7 228 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 TGIF2LXQ8IUE1 241 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 C1orf87Q8N0U7 546 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 LYPD6BQ8NI32 183 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 VSIRQ9H7M9 311 aa12.81□□□□□ -0.36
CACTIN-203ENST00000429344 AURKAIP1Q9NWT8 199 aaPredicted RBP12.81□□□□□ -0.36
CACTIN-203ENST00000429344 KLRC4-KLRK1H3BQV0 150 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 RRP8O43159 456 aaKnown RBP12.8□□□□□ -0.36
CACTIN-203ENST00000429344 PLP2Q04941 152 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 HIKESHIQ53FT3 197 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.8□□□□□ -0.36
CACTIN-203ENST00000429344 OR56B2PQ8NGI1 322 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 NABP1Q96AH0 204 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 TMEM222Q9H0R3 208 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 KIAA1456Q9P272 454 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 COL6A6A6NMZ7 2263 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 ZNF729A6NN14 1252 aaPredicted RBP12.8□□□□□ -0.36
CACTIN-203ENST00000429344 DTYMKP23919 212 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 MEOX1P50221 254 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 ERVS71-1P61550 626 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 PSG4Q00888 419 aa12.8□□□□□ -0.36
CACTIN-203ENST00000429344 SSC4DQ8WTU2 575 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms