RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 KCTD7Q96MP8 289 aa10.25□□□□□ -0.77
HLA-F-219ENST00000429294 ISG20L2Q9H9L3 353 aaKnown RBP10.25□□□□□ -0.77
HLA-F-219ENST00000429294 TMEM138Q9NPI0 162 aa10.25□□□□□ -0.77
HLA-F-219ENST00000429294 IL36GQ9NZH8 169 aa10.25□□□□□ -0.77
HLA-F-219ENST00000429294 ZNF580Q9UK33 172 aa10.25□□□□□ -0.77
HLA-F-219ENST00000429294 VSIG4Q9Y279 399 aa10.25□□□□□ -0.77
HLA-F-219ENST00000429294 IGHV3-43A0A0B4J1X8 118 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 C15orf65H3BRN8 121 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 AIPO00170 330 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 GEMIN2O14893 280 aaKnown RBP10.24□□□□□ -0.77
HLA-F-219ENST00000429294 IGF1P05019 195 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 ALPLP05186 524 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 IGHV3-43DP0DP04 118 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 SERPINA2P20848 420 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 PSMB8P28062 276 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 ZNF93P35789 620 aaPredicted RBP10.24□□□□□ -0.77
HLA-F-219ENST00000429294 CFHR3Q02985 330 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 ZNF616Q08AN1 781 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 FHL3Q13643 280 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 TMEM30BQ3MIR4 351 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 ZNF529Q6P280 563 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 ZNF429Q86V71 674 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 FAM71E2Q8N5Q1 922 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 TMEM104Q8NE00 496 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 OR51A2Q8NGJ7 313 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 OR1N2Q8NGR9 330 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 UBALD1Q8TB05 177 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 ST6GALNAC6Q969X2 333 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 UBE2E2Q96LR5 201 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 HSPB9Q9BQS6 159 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 SPACA1Q9HBV2 294 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 PALMDQ9NP74 551 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 ERVK13-1Q9NX77 482 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 TAS2R4Q9NYW5 299 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 ZNF107Q9UII5 783 aaPredicted RBP10.24□□□□□ -0.77
HLA-F-219ENST00000429294 GMPPBQ9Y5P6 360 aa10.24□□□□□ -0.77
HLA-F-219ENST00000429294 TENM2Q9NT68 2774 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 ZNF736B4DX44 427 aaPredicted RBP10.23□□□□□ -0.77
HLA-F-219ENST00000429294 GTF2F2P13984 249 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 F2RL1P55085 397 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 RAB40BQ12829 278 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 GPR176Q14439 515 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 MMDQ15546 238 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 ZIK1Q3SY52 487 aaPredicted RBP10.23□□□□□ -0.77
HLA-F-219ENST00000429294 CASC10Q5T4H9 136 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 C6orf183Q5T699 404 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 DDI2Q5TDH0 399 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 STEAP3Q658P3 488 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 SLC25A48Q6ZT89 311 aaKnown RBP10.23□□□□□ -0.77
HLA-F-219ENST00000429294 TMEM106AQ96A25 262 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 RCHY1Q96PM5 261 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 ZMAT4Q9H898 229 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 TRAPPC2LQ9UL33 140 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 ERGIC3Q9Y282 383 aa10.23□□□□□ -0.77
HLA-F-219ENST00000429294 MCRIP1C9JLW8 97 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 E9PI62 339 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 EI24O14681 340 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 MT-ND4P03905 459 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 SLC2A2P11168 524 aaPredicted RBP10.22□□□□□ -0.77
HLA-F-219ENST00000429294 MYF6P23409 242 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 BDKRB2P30411 391 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 ALDH3A2P51648 485 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 ZNF137PP52743 207 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 RUNX1Q01196 453 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 SLC22A6Q4U2R8 563 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 CCDC58Q4VC31 144 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 RPL22L1Q6P5R6 122 aaKnown RBP10.22□□□□□ -0.77
HLA-F-219ENST00000429294 TRAT1Q6PIZ9 186 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 ZNF497Q6ZNH5 498 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 PRR18Q8N4B5 295 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 GHITMQ9H3K2 345 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 AMBNQ9NP70 447 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 RPL36Q9Y3U8 105 aaKnown RBP10.22□□□□□ -0.77
HLA-F-219ENST00000429294 WSB1Q9Y6I7 421 aa10.22□□□□□ -0.77
HLA-F-219ENST00000429294 C12orf77C9JDV5 145 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 OVOL1O14753 267 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 LYL1P12980 280 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 DOC2BQ14184 412 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 SYT6Q5T7P8 510 aaPredicted RBP10.21□□□□□ -0.77
HLA-F-219ENST00000429294 ZNF491Q8N8L2 437 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 OR10V1Q8NGI7 309 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 MYOZ3Q8TDC0 251 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 OR5B12Q96R08 314 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 ZNF251Q9BRH9 671 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 ISYNA1Q9NPH2 558 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 ETAA1Q9NY74 926 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 ZNF581Q9P0T4 197 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 CKLFQ9UBR5 152 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 AASSQ9UDR5 926 aa10.21□□□□□ -0.77
HLA-F-219ENST00000429294 I3L521 148 aa10.2□□□□□ -0.78
HLA-F-219ENST00000429294 SLC31A2O15432 143 aa10.2□□□□□ -0.78
HLA-F-219ENST00000429294 LANCL1O43813 399 aa10.2□□□□□ -0.78
HLA-F-219ENST00000429294 SAP30O75446 220 aa10.2□□□□□ -0.78
HLA-F-219ENST00000429294 CA11O75493 328 aa10.2□□□□□ -0.78
HLA-F-219ENST00000429294 GTF2A1P52655 376 aaPredicted RBP10.2□□□□□ -0.78
HLA-F-219ENST00000429294 LSAMPQ13449 338 aa10.2□□□□□ -0.78
HLA-F-219ENST00000429294 CT45A1Q5HYN5 189 aa10.2□□□□□ -0.78
HLA-F-219ENST00000429294 TMPRSS11AQ6ZMR5 421 aa10.2□□□□□ -0.78
HLA-F-219ENST00000429294 SBSPONQ8IVN8 264 aa10.2□□□□□ -0.78
HLA-F-219ENST00000429294 CT45A3Q8NHU0 189 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms