RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 SERPINE3A8MV23 424 aa18.15■□□□□ 0.5
PTPN18-205ENST00000428843 SPINT2O43291 252 aa18.15■□□□□ 0.5
PTPN18-205ENST00000428843 HBZP02008 142 aa18.15■□□□□ 0.5
PTPN18-205ENST00000428843 CD3GP09693 182 aa18.15■□□□□ 0.5
PTPN18-205ENST00000428843 ZNF182P17025 639 aaPredicted RBP18.15■□□□□ 0.5
PTPN18-205ENST00000428843 ARL6IP1Q15041 203 aa18.15■□□□□ 0.5
PTPN18-205ENST00000428843 ZNF554Q86TJ5 538 aa18.15■□□□□ 0.5
PTPN18-205ENST00000428843 OR1L1Q8NH94 360 aa18.15■□□□□ 0.5
PTPN18-205ENST00000428843 ACOT12Q8WYK0 555 aa18.15■□□□□ 0.5
PTPN18-205ENST00000428843 RBM38Q9H0Z9 239 aaKnown RBP18.15■□□□□ 0.5
PTPN18-205ENST00000428843 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.15■□□□□ 0.52e-6■■■■□ 19.9
PTPN18-205ENST00000428843 ELF5Q9UKW6 265 aaPredicted RBP18.15■□□□□ 0.5
PTPN18-205ENST00000428843 CCDC160A6NGH7 325 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 F2RL2O00254 374 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 SDCBPO00560 298 aaPredicted RBP18.14■□□□□ 0.49
PTPN18-205ENST00000428843 LGALS4P56470 323 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 MRPS15P82914 257 aaKnown RBP18.14■□□□□ 0.49
PTPN18-205ENST00000428843 HMGN3Q15651 99 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 ZNF260Q3ZCT1 412 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 MOB1BQ7L9L4 216 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 DYNC2LI1Q8TCX1 351 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 C17orf50Q8WW18 174 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 AP3S1Q92572 193 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 LEAP2Q969E1 77 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 AJUBAQ96IF1 538 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 RAB9BQ9NP90 201 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 FAM96BQ9Y3D0 163 aa18.14■□□□□ 0.49
PTPN18-205ENST00000428843 A0A0A6YYH2 397 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 IGHV3-43A0A0B4J1X8 118 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 A6NJ64 397 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 TCF21O43680 179 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 IGHV3-7P01780 117 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 IGHV3-43DP0DP04 118 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 ARFRP1Q13795 201 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 FAM53AQ6NSI3 398 aaPredicted RBP18.13■□□□□ 0.49
PTPN18-205ENST00000428843 LHFPL4Q7Z7J7 247 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 OR52M1Q8NGK5 317 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 ZDHHC16Q969W1 377 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 PRDM13Q9H4Q3 707 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 Q9N2K0 584 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 DIABLOQ9NR28 239 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 NF1P21359 2839 aa18.13■□□□□ 0.49
PTPN18-205ENST00000428843 TRAV18A0A075B6X5 111 aa18.12■□□□□ 0.49
PTPN18-205ENST00000428843 POM121CA8CG34 1229 aa18.12■□□□□ 0.49
PTPN18-205ENST00000428843 GSTP1P09211 210 aaKnown RBP18.12■□□□□ 0.49
PTPN18-205ENST00000428843 SOX6P35712 828 aa18.12■□□□□ 0.49
PTPN18-205ENST00000428843 LOXL3P58215 753 aa18.12■□□□□ 0.49
PTPN18-205ENST00000428843 MZT2AQ6P582 158 aa18.12■□□□□ 0.49
PTPN18-205ENST00000428843 RBMS3Q6XE24 437 aaKnown RBP18.12■□□□□ 0.49
PTPN18-205ENST00000428843 IZUMO1Q8IYV9 350 aa18.12■□□□□ 0.49
PTPN18-205ENST00000428843 S100A16Q96FQ6 103 aaKnown RBP18.12■□□□□ 0.49
PTPN18-205ENST00000428843 GFOD1Q9NXC2 390 aa18.12■□□□□ 0.49
PTPN18-205ENST00000428843 TBL2Q9Y4P3 447 aaKnown RBP18.12■□□□□ 0.49
PTPN18-205ENST00000428843 A0A0A6YYJ9 748 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 TMEM235A6NFC5 223 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 TOR1AO14656 332 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 HPGDSO60760 199 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 VENTXO95231 258 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 IGLV1-47P01700 117 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 EIF4EP06730 217 aaKnown RBP18.11■□□□□ 0.49
PTPN18-205ENST00000428843 FCGR3AP08637 254 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 FBP1P09467 338 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 HILS1P60008 231 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 TMEM30BQ3MIR4 351 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 LDLRAD2Q5SZI1 272 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 HACD4Q5VWC8 232 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 Q6YL49 198 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 DTX3Q8N9I9 347 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 OR4P4Q8NGL7 312 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 OR9G1Q8NH87 305 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 ZNF596Q8TC21 504 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 CMTM3Q96MX0 182 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 ESM1Q9NQ30 184 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 CCDC59Q9P031 241 aaKnown RBP18.11■□□□□ 0.49
PTPN18-205ENST00000428843 ZNRD1Q9P1U0 126 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 MGAT4AQ9UM21 535 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 PSG11Q9UQ72 335 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 C2CD3Q4AC94 2353 aa18.11■□□□□ 0.49
PTPN18-205ENST00000428843 XRCC3O43542 346 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 TALDO1P37837 337 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 GNG10P50151 68 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 PRRX1P54821 245 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 HLA-DRB3P79483 266 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 SRSF2Q01130 221 aaKnown RBP18.1■□□□□ 0.49
PTPN18-205ENST00000428843 BAMBIQ13145 260 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 PNLIPRP3Q17RR3 467 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 HLA-DRB5Q30154 266 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 MINOS1Q5TGZ0 78 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 BEND2Q8NDZ0 799 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 GALMQ96C23 342 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 GNG12Q9UBI6 72 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 RSL24D1Q9UHA3 163 aaKnown RBP18.1■□□□□ 0.49
PTPN18-205ENST00000428843 MINOS1-NBL1R4GNA1 71 aa18.1■□□□□ 0.49
PTPN18-205ENST00000428843 J3QR06 171 aa18.09■□□□□ 0.49
PTPN18-205ENST00000428843 APOA1P02647 267 aa18.09■□□□□ 0.49
PTPN18-205ENST00000428843 MELTFP08582 738 aa18.09■□□□□ 0.49
PTPN18-205ENST00000428843 PAX6P26367 422 aa18.09■□□□□ 0.49
PTPN18-205ENST00000428843 GNG2P59768 71 aa18.09■□□□□ 0.49
PTPN18-205ENST00000428843 HTD2P86397 168 aa18.09■□□□□ 0.49
PTPN18-205ENST00000428843 GNMTQ14749 295 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms