RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 RTN4IP1Q8WWV3 396 aaPredicted RBP13.47□□□□□ -0.25
TRIM39-209ENST00000428728 RBMXL1Q96E39 390 aaKnown RBP13.47□□□□□ -0.25
TRIM39-209ENST00000428728 BANF2Q9H503 90 aa13.47□□□□□ -0.25
TRIM39-209ENST00000428728 ETAA1Q9NY74 926 aa13.47□□□□□ -0.25
TRIM39-209ENST00000428728 GNG12Q9UBI6 72 aa13.47□□□□□ -0.25
TRIM39-209ENST00000428728 TRAPPC2LQ9UL33 140 aa13.47□□□□□ -0.25
TRIM39-209ENST00000428728 C12orf77C9JDV5 145 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 MCRIP1C9JLW8 97 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 MAS1P04201 325 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 ST3GAL4Q11206 333 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 EBI3Q14213 229 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 DEFB121Q5J5C9 76 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 SYT6Q5T7P8 510 aaPredicted RBP13.46□□□□□ -0.25
TRIM39-209ENST00000428728 TTC23Q5W5X9 447 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 RAB12Q6IQ22 244 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 TGIF2LXQ8IUE1 241 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 LINC00311Q8N616 119 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 Q8N6K4 173 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 DUX3Q96PT4 197 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 GPR61Q9BZJ8 451 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 SPACA1Q9HBV2 294 aa13.46□□□□□ -0.25
TRIM39-209ENST00000428728 RCC2Q9P258 522 aaKnown RBP13.46□□□□□ -0.25
TRIM39-209ENST00000428728 TRBV5-7A0A0A0MS05 114 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 ZNF736B4DX44 427 aaPredicted RBP13.45□□□□□ -0.26
TRIM39-209ENST00000428728 AP4M1O00189 453 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 SPINT2O43291 252 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 GPX5O75715 221 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 GPR12P47775 334 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 RAB25P57735 213 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 EGFEM1PQ0D2K5 195 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 LCNL1Q6ZST4 164 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 DHRSXQ8N5I4 330 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 COMMD1Q8N668 190 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 C8orf31Q8N9H6 132 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 Q8N9W7 124 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 ZNF485Q8NCK3 441 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 TMEM104Q8NE00 496 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 OR1L1Q8NH94 360 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 GGHQ92820 318 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 ST6GALNAC6Q969X2 333 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 CYYR1Q96J86 154 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 SELENOIQ9C0D9 397 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 ABCG5Q9H222 651 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 ZFP57Q9NU63 452 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 LIN7CQ9NUP9 197 aaKnown RBP13.45□□□□□ -0.26
TRIM39-209ENST00000428728 PEX16Q9Y5Y5 336 aa13.45□□□□□ -0.26
TRIM39-209ENST00000428728 CRTAPO75718 401 aaPredicted RBP13.44□□□□□ -0.26
TRIM39-209ENST00000428728 MOSP00540 346 aa13.44□□□□□ -0.26
TRIM39-209ENST00000428728 HBZP02008 142 aa13.44□□□□□ -0.26
TRIM39-209ENST00000428728 MGMTP16455 207 aa13.44□□□□□ -0.26
TRIM39-209ENST00000428728 VHLP40337 213 aa13.44□□□□□ -0.26
TRIM39-209ENST00000428728 TAS2R43P59537 309 aa13.44□□□□□ -0.26
TRIM39-209ENST00000428728 ADARB1P78563 741 aaKnown RBP13.44□□□□□ -0.26
TRIM39-209ENST00000428728 C6orf183Q5T699 404 aa13.44□□□□□ -0.26
TRIM39-209ENST00000428728 C11orf87Q6NUJ2 197 aa13.44□□□□□ -0.26
TRIM39-209ENST00000428728 SLC25A48Q6ZT89 311 aaKnown RBP13.44□□□□□ -0.26
TRIM39-209ENST00000428728 ZNF695Q8IW36 515 aa13.44□□□□□ -0.26
TRIM39-209ENST00000428728 ZNF439Q8NDP4 499 aa13.44□□□□□ -0.26
TRIM39-209ENST00000428728 DERL3Q96Q80 235 aa13.44□□□□□ -0.26
TRIM39-209ENST00000428728 P2RX4Q99571 388 aa13.44□□□□□ -0.26
TRIM39-209ENST00000428728 UBE2QL1A1L167 161 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 MYL12BO14950 172 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 TXNL1O43396 289 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 RPLP1P05386 114 aaKnown RBP13.43□□□□□ -0.26
TRIM39-209ENST00000428728 RCC1P18754 421 aaPredicted RBP13.43□□□□□ -0.26
TRIM39-209ENST00000428728 CELP19835 753 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 CD1BP29016 333 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 SLC6A1P30531 599 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 CAPGP40121 348 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 MYCNOSP40205 109 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 DOC2BQ14184 412 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 DEFB136Q30KP8 78 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 Q3ZCU0 254 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 TEX38Q6PEX7 206 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 AHSA2Q719I0 299 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 TFAP2CQ92754 450 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 FAM46BQ96A09 425 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 MRPS24Q96EL2 167 aaKnown RBP13.43□□□□□ -0.26
TRIM39-209ENST00000428728 S1PR3Q99500 378 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 RASL11BQ9BPW5 248 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 HSPB9Q9BQS6 159 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 MCRIP2Q9BUT9 160 aaKnown RBP13.43□□□□□ -0.26
TRIM39-209ENST00000428728 RAB9BQ9NP90 201 aa13.43□□□□□ -0.26
TRIM39-209ENST00000428728 EFCAB10A6NFE3 127 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 GNAO1P09471 354 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 ZNF134P52741 427 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 ZNF137PP52743 207 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 GPR50Q13585 617 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 GNMTQ14749 295 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 RCN1Q15293 331 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 TMEM30BQ3MIR4 351 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 CT45A1Q5HYN5 189 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 CXorf66Q5JRM2 361 aaPredicted RBP13.42□□□□□ -0.26
TRIM39-209ENST00000428728 TRAT1Q6PIZ9 186 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 C8orf59Q8N0T1 100 aaPredicted RBP13.42□□□□□ -0.26
TRIM39-209ENST00000428728 PACRGLQ8N7B6 248 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 CT45A3Q8NHU0 189 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 RAX2Q96IS3 184 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 Q96M66 194 aa13.42□□□□□ -0.26
TRIM39-209ENST00000428728 PLSCR3Q9NRY6 295 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms