RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 RBM11P57052 281 aaKnown RBP14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 GABPB1Q06547 395 aaPredicted RBP14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 KIAA0141Q14154 515 aaPredicted RBP14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 MMDQ15546 238 aa14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 OR5AK2Q8NH90 309 aa14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 NEK7Q8TDX7 302 aa14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 TRUB1Q8WWH5 349 aaKnown RBP14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 SLC7A6OSQ96CW6 309 aaPredicted RBP14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 CITED4Q96RK1 184 aa14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 PDCD1LG2Q9BQ51 273 aa14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 CHCHD6Q9BRQ6 235 aa14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 ALG8Q9BVK2 526 aa14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 AP4S1Q9Y587 144 aa14.21□□□□□ -0.13
UPK3BP1-201ENST00000428678 G3V318 75 aa14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 ORC5O43913 435 aa14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 GP9P14770 177 aa14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 PPIFP30405 207 aaKnown RBP14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 ATAD3CQ5T2N8 411 aa14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 SLC25A48Q6ZT89 311 aaKnown RBP14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 LHFPL3Q86UP9 236 aa14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 OR52N1Q8NH53 320 aa14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 METTL9Q9H1A3 318 aa14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 IFT22Q9H7X7 185 aa14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 ISG20L2Q9H9L3 353 aaKnown RBP14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 PARP11Q9NR21 331 aa14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 GNG12Q9UBI6 72 aa14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 OAZ3Q9UMX2 235 aa14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 ING4Q9UNL4 249 aa14.2□□□□□ -0.14
UPK3BP1-201ENST00000428678 TRIM64CA6NLI5 447 aa14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 E9PI62 339 aa14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 GEMIN2O14893 280 aaKnown RBP14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 ATP6V0E1O15342 81 aa14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 CSTBP04080 98 aaKnown RBP14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 FCGR1AP12314 374 aa14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 SOX2P48431 317 aa14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 GALEQ14376 348 aa14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 NHLRC3Q5JS37 347 aa14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 ZNF529Q6P280 563 aa14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 ASCL4Q6XD76 172 aa14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 OR10V1Q8NGI7 309 aa14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 LGALS12Q96DT0 336 aa14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 MYCBPQ99417 103 aaPredicted RBP14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 CHCHD3Q9NX63 227 aaKnown RBP14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 TAS2R4Q9NYW5 299 aa14.19□□□□□ -0.14
UPK3BP1-201ENST00000428678 SAC3D1A6NKF1 404 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 AIPO00170 330 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 IGLV1-40P01703 118 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 MT-ND4P03905 459 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 SERPINA2P20848 420 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 RAB9AP51151 201 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 ZNF137PP52743 207 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 SLURP1P55000 103 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 LSAMPQ13449 338 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 SRSF7Q16629 238 aaKnown RBP eCLIP14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 Q3ZCU0 254 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 CT45A1Q5HYN5 189 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 MEDAGQ5VYS4 303 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 ZNF497Q6ZNH5 498 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 SYS1Q8N2H4 156 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 STX19Q8N4C7 294 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 CT45A3Q8NHU0 189 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 DLX4Q92988 240 aaPredicted RBP14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 ALX4Q9H161 411 aaPredicted RBP14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 OR51J1Q9H342 316 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 IL36GQ9NZH8 169 aa14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 EXOGQ9Y2C4 368 aaKnown RBP14.18□□□□□ -0.14
UPK3BP1-201ENST00000428678 TRAV41A0A0B4J266 112 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 SNTNA6NMZ2 147 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 C12orf77C9JDV5 145 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 SPINT2O43291 252 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 VHLP40337 213 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 ZNF134P52741 427 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 SNRPGP62308 76 aaKnown RBP14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 SLC25A30Q5SVS4 291 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 LINC00596Q86U02 117 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 PRR18Q8N4B5 295 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 ZNF439Q8NDP4 499 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 OR6Q1Q8NGQ2 317 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 ISOC1Q96CN7 298 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 S100A13Q99584 98 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 JAM3Q9BX67 310 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 GHITMQ9H3K2 345 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 TRAPPC2LQ9UL33 140 aa14.17□□□□□ -0.14
UPK3BP1-201ENST00000428678 LINC01619G3V211 115 aa14.16□□□□□ -0.14
UPK3BP1-201ENST00000428678 LANCL1O43813 399 aa14.16□□□□□ -0.14
UPK3BP1-201ENST00000428678 GBX2P52951 348 aaPredicted RBP14.16□□□□□ -0.14
UPK3BP1-201ENST00000428678 ACTBP60709 375 aa14.16□□□□□ -0.14
UPK3BP1-201ENST00000428678 MPV17LQ2QL34 196 aa14.16□□□□□ -0.14
UPK3BP1-201ENST00000428678 ARPC1AQ92747 370 aa14.16□□□□□ -0.14
UPK3BP1-201ENST00000428678 CENPNQ96H22 339 aaPredicted RBP14.16□□□□□ -0.14
UPK3BP1-201ENST00000428678 RAB9BQ9NP90 201 aa14.16□□□□□ -0.14
UPK3BP1-201ENST00000428678 AASSQ9UDR5 926 aa14.16□□□□□ -0.14
UPK3BP1-201ENST00000428678 IGHV7-81A0A0B4J1V7 117 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 FAM90A10PA6NDY2 464 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 HLA-DRB1P01911 266 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 HBZP02008 142 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 CD2P06729 351 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 CNTFRP26992 372 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 BLVRBP30043 206 aaPredicted RBP14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 ZNF93P35789 620 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms