RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 NAPSAO96009 420 aa20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 PAX6P26367 422 aa20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 PRRX1P54821 245 aa20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 LSM3P62310 102 aaKnown RBP20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 SSX2Q16385 188 aa20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 HLA-DRB5Q30154 266 aa20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 UTF1Q5T230 341 aa20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 UBALD1Q8TB05 177 aa20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 CREB3L1Q96BA8 519 aa20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 PECRQ9BY49 303 aa20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 RIMS4Q9H426 269 aaPredicted RBP20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 CHMP1AQ9HD42 196 aaPredicted RBP20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 KCNIP1Q9NZI2 227 aa20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 AK3Q9UIJ7 227 aa20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 VPREB3Q9UKI3 123 aa20.36■□□□□ 0.85
HERPUD2-205ENST00000427455 SDCBPO00560 298 aaPredicted RBP20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 HBZP02008 142 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 TGFBR1P36897 503 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 SCAND1P57086 179 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 PLAC9Q5JTB6 97 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 MOB1BQ7L9L4 216 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 DYNAPQ8N1N2 210 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 LGALS14Q8TCE9 139 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 RAB3CQ96E17 227 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 SSX3Q99909 188 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 MMP28Q9H239 520 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 TAF9BQ9HBM6 251 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 DPM3Q9P2X0 92 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 STAB1Q9NY15 2570 aa20.35■□□□□ 0.85
HERPUD2-205ENST00000427455 VGLL3A8MV65 326 aa20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 H3BUX3 64 aa20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 TMEM127O75204 238 aa20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 SNRPBP14678 240 aaKnown RBP20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 MOGAT2Q3SYC2 334 aa20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 CROCCP3Q8IVE0 287 aa20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 PRR18Q8N4B5 295 aa20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 OR10R2Q8NGX6 335 aa20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 LEAP2Q969E1 77 aa20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 C12orf4Q9NQ89 552 aa20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 GFOD1Q9NXC2 390 aa20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 PSG11Q9UQ72 335 aa20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 AMMECR1Q9Y4X0 333 aaPredicted RBP20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 HILPDAQ9Y5L2 63 aa20.34■□□□□ 0.85
HERPUD2-205ENST00000427455 DNHD1Q96M86 4753 aa20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 TRBV6-6A0A0A6YYG2 114 aa20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 LEUTXA8MZ59 168 aa20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 J3QR06 171 aa20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 RAB27BO00194 218 aa20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 CEACAM3P40198 252 aa20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 LOXL3P58215 753 aa20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 RPL15P61313 204 aaKnown RBP20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 IDNKQ5T6J7 187 aa20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 ZNF880Q6PDB4 577 aa20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 OR1L1Q8NH94 360 aa20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 ATG5Q9H1Y0 275 aa20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 ETV7Q9Y603 341 aa20.33■□□□□ 0.85
HERPUD2-205ENST00000427455 FAM181BA6NEQ2 426 aa20.32■□□□□ 0.84
HERPUD2-205ENST00000427455 BUB1B-PAK6H3BSN5 160 aa20.32■□□□□ 0.84
HERPUD2-205ENST00000427455 GPR137BO60478 399 aa20.32■□□□□ 0.84
HERPUD2-205ENST00000427455 IGHV3-7P01780 117 aa20.32■□□□□ 0.84
HERPUD2-205ENST00000427455 ALDH3B2P48448 385 aa20.32■□□□□ 0.84
HERPUD2-205ENST00000427455 GNG10P50151 68 aa20.32■□□□□ 0.84
HERPUD2-205ENST00000427455 HMGN3Q15651 99 aa20.32■□□□□ 0.84
HERPUD2-205ENST00000427455 Q3ZCU0 254 aa20.32■□□□□ 0.84
HERPUD2-205ENST00000427455 PLA1AQ53H76 456 aa20.32■□□□□ 0.84
HERPUD2-205ENST00000427455 GCDHQ92947 438 aaPredicted RBP20.32■□□□□ 0.84
HERPUD2-205ENST00000427455 HDHD3Q9BSH5 251 aaPredicted RBP20.32■□□□□ 0.84
HERPUD2-205ENST00000427455 ABCB10Q9NRK6 738 aa20.32■□□□□ 0.84
HERPUD2-205ENST00000427455 IGHV3-43A0A0B4J1X8 118 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 POM121CA8CG34 1229 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 MFNGO00587 321 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 SCGNO76038 276 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 TFAP2AP05549 437 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 IGHV3-43DP0DP04 118 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 HKR1P10072 659 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 HIST1H1DP16402 221 aaKnown RBP20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 DYNLT3P51808 116 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 NCS1P62166 190 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 Q6ZPA2 131 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 ANKRD13BQ86YJ7 626 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 C8orf31Q8N9H6 132 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 SPATA3Q8NHX4 192 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 SETD6Q8TBK2 473 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 CMSS1Q9BQ75 279 aaKnown RBP20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 ABRACLQ9P1F3 81 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 GNG12Q9UBI6 72 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 MGAT4AQ9UM21 535 aa20.31■□□□□ 0.84
HERPUD2-205ENST00000427455 TMEM89A2RUT3 159 aa20.3■□□□□ 0.84
HERPUD2-205ENST00000427455 GABARAPO95166 117 aa20.3■□□□□ 0.84
HERPUD2-205ENST00000427455 RPS19P39019 145 aaKnown RBP20.3■□□□□ 0.84
HERPUD2-205ENST00000427455 MRPS15P82914 257 aaKnown RBP20.3■□□□□ 0.84
HERPUD2-205ENST00000427455 ARL6IP1Q15041 203 aa20.3■□□□□ 0.84
HERPUD2-205ENST00000427455 TPTE2P1Q5T6R2 138 aa20.3■□□□□ 0.84
HERPUD2-205ENST00000427455 OLFML2AQ68BL7 652 aa20.3■□□□□ 0.84
HERPUD2-205ENST00000427455 GPR141Q7Z602 305 aa20.3■□□□□ 0.84
HERPUD2-205ENST00000427455 RHBDL2Q9NX52 303 aa20.3■□□□□ 0.84
HERPUD2-205ENST00000427455 KCNK7Q9Y2U2 307 aa20.3■□□□□ 0.84
HERPUD2-205ENST00000427455 SERPINE3A8MV23 424 aa20.29■□□□□ 0.84
HERPUD2-205ENST00000427455 OOSP1A8MZH6 123 aa20.29■□□□□ 0.84
HERPUD2-205ENST00000427455 LY6LH3BQJ8 138 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms