RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 ARHGAP32A7KAX9 2087 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 NSD1Q96L73 2696 aaPredicted RBP4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 CSPG4Q6UVK1 2322 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 MTORP42345 2549 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 IGKV1D-8A0A087WSZ0 117 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 TRGV10A0A0A0MS01 117 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 IGHV3-43A0A0B4J1X8 118 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 CENPVL3A0A0U1RRI6 287 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 KBTBD11-OT1A0A1B0GTJ5 212 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 MEIOCA2RUB1 952 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 METTL21EPA6NDL7 271 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 FAM25AB3EWG3 89 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 FAM25CB3EWG5 89 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 FAM25GB3EWG6 89 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 C12orf77C9JDV5 145 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 M0R1W7 72 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 XRCC3O43542 346 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 TMEM127O75204 238 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 IGHV3-7P01780 117 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 HLA-DQB1P01920 261 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 APOA1P02647 267 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 IGHV1-8P0DP01 117 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 IGHV3-43DP0DP04 118 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 MED14OSP0DP75 135 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 GATA3P23771 443 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 COX7A1P24310 79 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 SOX6P35712 828 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 RANBP1P43487 201 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 KCNJ3P48549 501 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 TAS2R20P59543 309 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 DYNC1I2Q13409 638 aaKnown RBP4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 RBM39Q14498 530 aaKnown RBP4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 GNMTQ14749 295 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 LTC4SQ16873 150 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 MZT2AQ6P582 158 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 ZNF880Q6PDB4 577 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 BRD3OSQ6XYD6 125 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 LURAP1LQ8IV03 231 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 SETD6Q8TBK2 473 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 C17orf50Q8WW18 174 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 ACOT12Q8WYK0 555 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 UPRTQ96BW1 309 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 ZNF714Q96N38 554 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 CMSS1Q9BQ75 279 aaKnown RBP4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 SUCNR1Q9BXA5 334 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 NCOR1P1Q9H4R4 102 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 LINC00574Q9H8X3 128 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 CHMP1AQ9HD42 196 aaPredicted RBP4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 TAS2R3Q9NYW6 316 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 NDUFA13Q9P0J0 144 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 ZNRD1Q9P1U0 126 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 ZNF69Q9UC07 566 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 ZNF230Q9UIE0 474 aaPredicted RBP4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 TRAPPC2LQ9UL33 140 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 UBE2J1Q9Y385 318 aaPredicted RBP4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 KPTNQ9Y664 436 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 TLN2Q9Y4G6 2542 aa4.66□□□□□ -1.66
HERPUD2-204ENST00000426180 YLPM1P49750 1951 aaKnown RBP4.65□□□□□ -1.66
HERPUD2-204ENST00000426180 TRBV6-6A0A0A6YYG2 114 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 TRAV40A0A0B4J280 105 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 IGKV1-6A0A0C4DH72 117 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 A0A1W2PPE3 182 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 FUOMA2VDF0 154 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 MEIS3P1A6NDR6 274 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 ZNF729A6NN14 1252 aaPredicted RBP4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 NPIPB11E5RHQ5 1161 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 CA11O75493 328 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 CLPXO76031 633 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 HBZP02008 142 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 FCER2P06734 321 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 MELTFP08582 738 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 FCGR3AP08637 254 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 SCTP09683 121 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 CD3GP09693 182 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 PRTN3P24158 256 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 NFYBP25208 207 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 PAX6P26367 422 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 LOXL3P58215 753 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 HMGN3Q15651 99 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 CNPY1Q3B7I2 92 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 RNASE12Q5GAN4 147 aaKnown RBP4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 TMEM69Q5SWH9 247 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 LDLRAD2Q5SZI1 272 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 HACD4Q5VWC8 232 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 CNIH2Q6PI25 160 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 HEPN1Q6WQI6 88 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 C1orf122Q6ZSJ8 110 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 SNX29P2Q8IUI4 249 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 BCL6BQ8N143 479 aaPredicted RBP4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 PRR18Q8N4B5 295 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 GVQW1Q8N7I0 195 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 OR52L2PQ8NGH6 319 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 OR10V1Q8NGI7 309 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 MCFD2Q8NI22 146 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 C22orf15Q8WYQ4 148 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 AP3S1Q92572 193 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 ARL11Q969Q4 196 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 S100A16Q96FQ6 103 aaKnown RBP4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 AJUBAQ96IF1 538 aa4.65□□□□□ -1.67
HERPUD2-204ENST00000426180 CMTM3Q96MX0 182 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms