RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 ERGIC3Q9Y282 383 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 RRP15Q9Y3B9 282 aaKnown RBP2.03□□□□□ -2.09
VPS13A-208ENST00000423463 DCHS2Q6V1P9 2916 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 CSPG4Q6UVK1 2322 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 HRNRQ86YZ3 2850 aaPredicted RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 HIVEP1P15822 2718 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 ACANP16112 2415 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 ABCA1O95477 2261 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 LOC105371242A0A075B767 164 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 A0A0G2JMP0 313 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 TRBV5-5A0A0J9YX44 114 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 A0A0X1KG70 313 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 FAM230AA0A1W2PPH8 454 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 A6NIN4 97 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 NKX6-3A6NJ46 265 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 TRAPPC2LH3BP13 241 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 SLC1A7O00341 560 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 MYL12BO14950 172 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 DENRO43583 198 aaKnown RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 NDUFB3O43676 98 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 MRPS14O60783 128 aaKnown RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 GPX5O75715 221 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 CYB5AP00167 134 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 ALDOBP05062 364 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 OCM2P0CE71 109 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 OCMP0CE72 109 aaPredicted RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 FAM157CP0CG43 387 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 PGA5P0DJD9 388 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 PPIAL4GP0DN37 164 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 CRHBPP24387 322 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 AZGP1P25311 298 aaKnown RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 SRP14P37108 136 aaKnown RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 HAAOP46952 286 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 GTF2A1P52655 376 aaPredicted RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 MTCP1P56278 107 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 WNT4P56705 351 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 ERVK11-1P61568 191 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 SLC35A2P78381 396 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 LCN2P80188 198 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 PAX8Q06710 450 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 SCGB2A2Q13296 93 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 GPR50Q13585 617 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 YIF1BQ5BJH7 314 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 RBM48Q5RL73 367 aaKnown RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 DMKNQ6E0U4 476 aaPredicted RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 FAHD2BQ6P2I3 314 aaPredicted RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 C11orf88Q6PI97 169 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 BTNL3Q6UXE8 466 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 RBMS3Q6XE24 437 aaKnown RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF841Q6ZN19 808 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 ACP7Q6ZNF0 438 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 Q8IYB0 196 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 SAXO1Q8IYX7 474 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 MS4A15Q8N5U1 240 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 C19orf18Q8NEA5 215 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 OR4M2Q8NGB6 313 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 OR10AC1Q8NH08 325 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 ANGPTL6Q8NI99 470 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 TRMT10AQ8TBZ6 339 aaKnown RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 CCDC107Q8WV48 283 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 THRSPQ92748 146 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 GHSRQ92847 366 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 SMIM19Q96E16 107 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 SDSLQ96GA7 329 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 FAHD2AQ96GK7 314 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 OPALINQ96PE5 141 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 CCL13Q99616 98 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 PDCD1LG2Q9BQ51 273 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 NRIP2Q9BQI9 281 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 RHOFQ9HBH0 211 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 LPAR2Q9HBW0 351 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 Q9N2K0 584 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 ISYNA1Q9NPH2 558 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 BLOC1S6Q9UL45 172 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 INSIG2Q9Y5U4 225 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 AUP1Q9Y679 476 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 HIVEP2P31629 2446 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 DYSFO75923 2080 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 OTOGQ6ZRI0 2925 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 LRBAP50851 2863 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 IGHV3OR15-7A0A075B7D8 119 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 IGHV2-70DA0A0C4DH43 119 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 IGKV1-9A0A0C4DH69 117 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 OR2AT4A6NND4 320 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 H3BSH0 61 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 SIGLEC5O15389 551 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 MAGEB3O15480 346 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 PHF1O43189 567 aaPredicted RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 AKR7A2O43488 359 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 SULT1B1O43704 296 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 SYNGR1O43759 233 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 ENSAO43768 121 aaKnown RBP2.02□□□□□ -2.09
VPS13A-208ENST00000423463 RHBDL1O75783 438 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 NXPH2O95156 264 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 LALBAP00709 142 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 GYPAP02724 150 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 CSN3P07498 182 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 PSG2P11465 335 aa2.02□□□□□ -2.09
VPS13A-208ENST00000423463 ADRA2CP18825 462 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms