RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 ZFAND2BQ8WV99 257 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 PHF21AQ96BD5 680 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 MALSU1Q96EH3 234 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 MDFIQ99750 246 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 SSX3Q99909 188 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 CMSS1Q9BQ75 279 aaKnown RBP12.79□□□□□ -0.36
BRAT1-202ENST00000421712 C19orf24Q9BVV8 132 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 RIMS4Q9H426 269 aaPredicted RBP12.79□□□□□ -0.36
BRAT1-202ENST00000421712 LINC00574Q9H8X3 128 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 TAF9BQ9HBM6 251 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 ZNRD1Q9P1U0 126 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 GNG12Q9UBI6 72 aa12.79□□□□□ -0.36
BRAT1-202ENST00000421712 IGHV3-43A0A0B4J1X8 118 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 TFAP2AP05549 437 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 CRYBA1P05813 215 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 CD3GP09693 182 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 IGHV3-43DP0DP04 118 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 GNB3P16520 340 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 CD34P28906 385 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 ALDH3B2P48448 385 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 PLAC9Q5JTB6 97 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 MINOS1Q5TGZ0 78 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 C16orf87Q6PH81 154 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 TMEM86BQ8N661 226 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.78□□□□□ -0.36
BRAT1-202ENST00000421712 OR1L1Q8NH94 360 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 HDHD3Q9BSH5 251 aaPredicted RBP12.78□□□□□ -0.36
BRAT1-202ENST00000421712 NAA50Q9GZZ1 169 aaKnown RBP12.78□□□□□ -0.36
BRAT1-202ENST00000421712 MEGF9Q9H1U4 602 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 ABCB10Q9NRK6 738 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 ABRACLQ9P1F3 81 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 POMT1Q9Y6A1 747 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 MINOS1-NBL1R4GNA1 71 aa12.78□□□□□ -0.36
BRAT1-202ENST00000421712 A0A087X0M5 115 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 A0A1B0GX30 115 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 FOXI3A8MTJ6 420 aaPredicted RBP12.77□□□□□ -0.37
BRAT1-202ENST00000421712 CLDN34H7C241 214 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 J3QR06 171 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 RNASE1P07998 156 aaKnown RBP12.77□□□□□ -0.37
BRAT1-202ENST00000421712 ARFRP1Q13795 201 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 LRRC75BQ2VPJ9 315 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 UTF1Q5T230 341 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 OLFML2AQ68BL7 652 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 SLC16A12Q6ZSM3 486 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 OR10V1Q8NGI7 309 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 OR4P4Q8NGL7 312 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 OR5H6Q8NGV6 325 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 OR10X1Q8NGY0 326 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 GCDHQ92947 438 aaPredicted RBP12.77□□□□□ -0.37
BRAT1-202ENST00000421712 CREB3L1Q96BA8 519 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 AJUBAQ96IF1 538 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 CHIAQ9BZP6 476 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 OR2S2Q9NQN1 319 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 MBNL3Q9NUK0 354 aaKnown RBP12.77□□□□□ -0.37
BRAT1-202ENST00000421712 GFOD1Q9NXC2 390 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 DPM3Q9P2X0 92 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 SCOCQ9UIL1 159 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 PSG11Q9UQ72 335 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 AMMECR1Q9Y4X0 333 aaPredicted RBP12.77□□□□□ -0.37
BRAT1-202ENST00000421712 ETV7Q9Y603 341 aa12.77□□□□□ -0.37
BRAT1-202ENST00000421712 A0A1W2PPE3 182 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 LEUTXA8MZ59 168 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 H3BUX3 64 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 RAB27BO00194 218 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 TMEM127O75204 238 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 SCGNO76038 276 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 NAPSAO96009 420 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 TALDO1P37837 337 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 CEACAM3P40198 252 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 SCAND1P57086 179 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 HLA-DRB5Q30154 266 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 LDLRAD2Q5SZI1 272 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 MOB1BQ7L9L4 216 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 C5orf24Q7Z6I8 188 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 CLVS1Q8IUQ0 354 aaPredicted RBP12.76□□□□□ -0.37
BRAT1-202ENST00000421712 OR52M1Q8NGK5 317 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 OR5R1Q8NH85 324 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 IL1F10Q8WWZ1 152 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 GALMQ96C23 342 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 MMP28Q9H239 520 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 C12orf4Q9NQ89 552 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 RHBDL2Q9NX52 303 aa12.76□□□□□ -0.37
BRAT1-202ENST00000421712 BUB1B-PAK6H3BSN5 160 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 F2RL2O00254 374 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 GABARAPO95166 117 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 IGLV1-47P01700 117 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 HIST1H1DP16402 221 aaKnown RBP12.75□□□□□ -0.37
BRAT1-202ENST00000421712 RPL5P46777 297 aaKnown RBP12.75□□□□□ -0.37
BRAT1-202ENST00000421712 RAB13P51153 203 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 ARHGDIBP52566 201 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 ARL6IP1Q15041 203 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 LY6EQ16553 131 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 TMEM30BQ3MIR4 351 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 CDNFQ49AH0 187 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 FAM53AQ6NSI3 398 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-202ENST00000421712 ZNF554Q86TJ5 538 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 DYNAPQ8N1N2 210 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 OR52L2PQ8NGH6 319 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 SLC25A46Q96AG3 418 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 RPEQ96AT9 228 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms