RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 CRYM-AS1A6NIL9 109 aa17.53■□□□□ 0.4
GPC1-202ENST00000420138 GSG1LQ6UXU4 331 aa17.53■□□□□ 0.4
GPC1-202ENST00000420138 LDLRAD3Q86YD5 345 aa17.53■□□□□ 0.4
GPC1-202ENST00000420138 PPP1R1CQ8WVI7 109 aa17.53■□□□□ 0.4
GPC1-202ENST00000420138 CITED4Q96RK1 184 aa17.53■□□□□ 0.4
GPC1-202ENST00000420138 KIF25Q9UIL4 384 aa17.53■□□□□ 0.4
GPC1-202ENST00000420138 PPP1R3CQ9UQK1 317 aa17.53■□□□□ 0.4
GPC1-202ENST00000420138 IGKV1D-13A0A0B4J2D9 117 aa17.52■□□□□ 0.4
GPC1-202ENST00000420138 RPS10-NUDT3A0A1W2PQS6 291 aa17.52■□□□□ 0.4
GPC1-202ENST00000420138 C5orf51A6NDU8 294 aa17.52■□□□□ 0.4
GPC1-202ENST00000420138 NPIPB11E5RHQ5 1161 aa17.52■□□□□ 0.4
GPC1-202ENST00000420138 IGKV1-13P0DP09 117 aa17.52■□□□□ 0.4
GPC1-202ENST00000420138 FAM209AQ5JX71 171 aa17.52■□□□□ 0.4
GPC1-202ENST00000420138 SLC38A6Q8IZM9 456 aa17.52■□□□□ 0.4
GPC1-202ENST00000420138 GSX2Q9BZM3 304 aa17.52■□□□□ 0.4
GPC1-202ENST00000420138 A0A0D9SG52 128 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 GNRHRP30968 328 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 PIGPP57054 158 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 HERV-K104P61576 105 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 TESK1Q15569 626 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 H1FOOQ8IZA3 346 aaPredicted RBP17.51■□□□□ 0.39
GPC1-202ENST00000420138 PIK3IP1Q96FE7 263 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 TAF9BQ9HBM6 251 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 RAB18Q9NP72 206 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 CISD1Q9NZ45 108 aaKnown RBP17.51■□□□□ 0.39
GPC1-202ENST00000420138 OR1A1Q9P1Q5 309 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 TNFRSF1AP19438 455 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 GLIPR1P48060 266 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 CYCSP99999 105 aaKnown RBP17.51■□□□□ 0.39
GPC1-202ENST00000420138 SWI5Q1ZZU3 235 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 STUMQ69YW2 141 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 OR11L1Q8NGX0 322 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 NMES1Q9C002 83 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 SLC2A9Q9NRM0 540 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 TNFSF18Q9UNG2 199 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 AUP1Q9Y679 476 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 ICE1Q9Y2F5 2266 aa17.51■□□□□ 0.39
GPC1-202ENST00000420138 C13orf42A0A1B0GVH6 325 aa17.5■□□□□ 0.39
GPC1-202ENST00000420138 LEUTXA8MZ59 168 aa17.5■□□□□ 0.39
GPC1-202ENST00000420138 B9A039 149 aa17.5■□□□□ 0.39
GPC1-202ENST00000420138 DIRAS3O95661 229 aa17.5■□□□□ 0.39
GPC1-202ENST00000420138 ZNF672Q499Z4 452 aaPredicted RBP17.5■□□□□ 0.39
GPC1-202ENST00000420138 LRRC37A5PQ49AS3 106 aa17.5■□□□□ 0.39
GPC1-202ENST00000420138 TPRX1Q8N7U7 411 aa17.5■□□□□ 0.39
GPC1-202ENST00000420138 UBALD1Q8TB05 177 aa17.5■□□□□ 0.39
GPC1-202ENST00000420138 THAP6Q8TBB0 222 aa17.5■□□□□ 0.39
GPC1-202ENST00000420138 SNX22Q96L94 193 aa17.5■□□□□ 0.39
GPC1-202ENST00000420138 RDH8Q9NYR8 311 aa17.5■□□□□ 0.39
GPC1-202ENST00000420138 C12orf77C9JDV5 145 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 B3GALNT1O75752 331 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 OR2F2O95006 317 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 GABRA2P47869 451 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 AP2S1P53680 142 aaPredicted RBP17.49■□□□□ 0.39
GPC1-202ENST00000420138 OR2F1Q13607 317 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 ZNF345Q14585 488 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 PHLDA2Q53GA4 152 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 ESCO2Q56NI9 601 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 KRBOX4Q5JUW0 171 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 TEX36Q5VZQ5 186 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 ZNRF1Q8ND25 227 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 OR10J5Q8NHC4 309 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 RTN4IP1Q8WWV3 396 aaPredicted RBP17.49■□□□□ 0.39
GPC1-202ENST00000420138 IL1F10Q8WWZ1 152 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 ANKHD1Q8IWZ3 2542 aaKnown RBP17.49■□□□□ 0.39
GPC1-202ENST00000420138 ROS1P08922 2347 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 KMT2BQ9UMN6 2715 aaPredicted RBP17.49■□□□□ 0.39
GPC1-202ENST00000420138 HEXAP06865 529 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 SLC51BQ86UW2 128 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 SGPP2Q8IWX5 399 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 PRR18Q8N4B5 295 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 KCNRGQ8N5I3 272 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 GALNT14Q96FL9 552 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 NAA60Q9H7X0 242 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 SAP30LQ9HAJ7 183 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 OR2W1Q9Y3N9 320 aa17.49■□□□□ 0.39
GPC1-202ENST00000420138 K7N7A8 449 aa17.48■□□□□ 0.39
GPC1-202ENST00000420138 IFNA2P01563 188 aa17.48■□□□□ 0.39
GPC1-202ENST00000420138 PSMB6P28072 239 aa17.48■□□□□ 0.39
GPC1-202ENST00000420138 OR13A1Q8NGR1 328 aa17.48■□□□□ 0.39
GPC1-202ENST00000420138 OR1L1Q8NH94 360 aa17.48■□□□□ 0.39
GPC1-202ENST00000420138 SDSLQ96GA7 329 aa17.48■□□□□ 0.39
GPC1-202ENST00000420138 MS4A5Q9H3V2 200 aa17.48■□□□□ 0.39
GPC1-202ENST00000420138 SPTBN1Q01082 2364 aaKnown RBP17.48■□□□□ 0.39
GPC1-202ENST00000420138 CACNA1DQ01668 2161 aa17.48■□□□□ 0.39
GPC1-202ENST00000420138 A0A1B0GW55 424 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 ADAP1O75689 374 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 DUX4L2P0CJ85 424 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 DUX4L3P0CJ86 424 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 DUX4L4P0CJ87 422 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 DUX4L5P0CJ88 424 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 DUX4L6P0CJ89 424 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 DUX4L7P0CJ90 424 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 SELLP14151 372 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 ABCA11PQ4W5N1 156 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 DUX4L9Q6RFH8 374 aaPredicted RBP17.47■□□□□ 0.39
GPC1-202ENST00000420138 ZNF818PQ6ZRF7 136 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 ACOT7LQ6ZUV0 252 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 SCARB1Q8WTV0 552 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 SECTM1Q8WVN6 248 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 DCTN5Q9BTE1 182 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms