RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 PRR18Q8N4B5 295 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 BEND2Q8NDZ0 799 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 OR4P4Q8NGL7 312 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 OR5H6Q8NGV6 325 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 OR10R2Q8NGX6 335 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 OR1L1Q8NH94 360 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 NDNFQ8TB73 568 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 SETD6Q8TBK2 473 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 PTX4Q96A99 478 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 RAB3CQ96E17 227 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 MDFIQ99750 246 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 ATG5Q9H1Y0 275 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 ZMAT3Q9HA38 289 aaKnown RBP10.12□□□□□ -0.79
SKA1-203ENST00000417656 MBNL3Q9NUK0 354 aaKnown RBP10.12□□□□□ -0.79
SKA1-203ENST00000417656 HSF4Q9ULV5 492 aa10.12□□□□□ -0.79
SKA1-203ENST00000417656 TBL2Q9Y4P3 447 aaKnown RBP10.12□□□□□ -0.79
SKA1-203ENST00000417656 FBN1P35555 2871 aaKnown RBP10.11□□□□□ -0.79
SKA1-203ENST00000417656 A0A075B6Q4 140 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 CLDN34H7C241 214 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 RAB27BO00194 218 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 SDCBPO00560 298 aaPredicted RBP10.11□□□□□ -0.79
SKA1-203ENST00000417656 MFNGO00587 321 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 NAPSAO96009 420 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 HBZP02008 142 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 RNASE1P07998 156 aaKnown RBP10.11□□□□□ -0.79
SKA1-203ENST00000417656 GZMHP20718 246 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 CTF1Q16619 201 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 FAM53AQ6NSI3 398 aaPredicted RBP10.11□□□□□ -0.79
SKA1-203ENST00000417656 TRAT1Q6PIZ9 186 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 OR10A7Q8NGE5 316 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 ZNF596Q8TC21 504 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 SSMEM1Q8WWF3 244 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 TMEM158Q8WZ71 300 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 SLC25A38Q96DW6 304 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 C19orf24Q9BVV8 132 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 CHIAQ9BZP6 476 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 TAF9BQ9HBM6 251 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 C12orf4Q9NQ89 552 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 RHBDL2Q9NX52 303 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 KCNK7Q9Y2U2 307 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 ETV7Q9Y603 341 aa10.11□□□□□ -0.79
SKA1-203ENST00000417656 A0A1W2PPE3 182 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 METTL21EPA6NDL7 271 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 H3BUX3 64 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 F2RL2O00254 374 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 TOR1AO14656 332 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 SPINT2O43291 252 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 IGLV1-47P01700 117 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 HIST1H1DP16402 221 aaKnown RBP10.1□□□□□ -0.79
SKA1-203ENST00000417656 GNB3P16520 340 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 IER3P46695 156 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 SCAND1P57086 179 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 HMGN3Q15651 99 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 FAM189A2Q15884 450 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 SSX2Q16385 188 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 LRRC75BQ2VPJ9 315 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 HLA-DRB5Q30154 266 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 MINOS1Q5TGZ0 78 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 MOB1BQ7L9L4 216 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 CROCCP3Q8IVE0 287 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 TMEM86BQ8N661 226 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 OR10V1Q8NGI7 309 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 OR9G1Q8NH87 305 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 FAM216AQ8WUB2 273 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 ZFAND2BQ8WV99 257 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 CMSS1Q9BQ75 279 aaKnown RBP10.1□□□□□ -0.79
SKA1-203ENST00000417656 GFOD1Q9NXC2 390 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 KCNIP1Q9NZI2 227 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 POMT1Q9Y6A1 747 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 MINOS1-NBL1R4GNA1 71 aa10.1□□□□□ -0.79
SKA1-203ENST00000417656 TRBV6-6A0A0A6YYG2 114 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 BTBD17A6NE02 478 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 CD3GP09693 182 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 HTR1DP28221 377 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 LOXL3P58215 753 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 ACTG1P63261 375 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 HLA-DRB3P79483 266 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 GNMTQ14749 295 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 ZNF880Q6PDB4 577 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 CLVS1Q8IUQ0 354 aaPredicted RBP10.09□□□□□ -0.79
SKA1-203ENST00000417656 OR52M1Q8NGK5 317 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 SLC25A46Q96AG3 418 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 SSX3Q99909 188 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 MMP28Q9H239 520 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 DPAGT1Q9H3H5 408 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 RAB9BQ9NP90 201 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 GNG12Q9UBI6 72 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 VPREB3Q9UKI3 123 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 PSG11Q9UQ72 335 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 HILPDAQ9Y5L2 63 aa10.09□□□□□ -0.79
SKA1-203ENST00000417656 J3QR06 171 aa10.08□□□□□ -0.8
SKA1-203ENST00000417656 SLC31A2O15432 143 aa10.08□□□□□ -0.8
SKA1-203ENST00000417656 RPL5P46777 297 aaKnown RBP10.08□□□□□ -0.8
SKA1-203ENST00000417656 PRRX1P54821 245 aa10.08□□□□□ -0.8
SKA1-203ENST00000417656 MRPS15P82914 257 aaKnown RBP10.08□□□□□ -0.8
SKA1-203ENST00000417656 LY6EQ16553 131 aa10.08□□□□□ -0.8
SKA1-203ENST00000417656 TMEM30BQ3MIR4 351 aa10.08□□□□□ -0.8
SKA1-203ENST00000417656 TPTE2P1Q5T6R2 138 aa10.08□□□□□ -0.8
SKA1-203ENST00000417656 ZNF554Q86TJ5 538 aa10.08□□□□□ -0.8
SKA1-203ENST00000417656 OR52L2PQ8NGH6 319 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms