RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 UBALD2Q8IYN6 164 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 TMEM251Q8N6I4 163 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 OR5D13Q8NGL4 314 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 LINC00470Q9BZP3 86 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 PRO3102Q9H379 93 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 ATPIF1Q9UII2 106 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 OR2W1Q9Y3N9 320 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 MED12LQ86YW9 2145 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 CLEC18AA5D8T8 446 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 LINC00587B1AMM8 73 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 H0Y980 276 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 IGHV2-5P01817 119 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 IAPPP10997 89 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 SAXO1Q8IYX7 474 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 FAM58AQ8N1B3 248 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 CLEC18CQ8NCF0 446 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 RNASE11Q8TAA1 199 aaKnown RBP12.32□□□□□ -0.44
HDAC9-208ENST00000417496 BCL2L14Q9BZR8 327 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 VSIRQ9H7M9 311 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 DLL3Q9NYJ7 618 aa12.32□□□□□ -0.44
HDAC9-208ENST00000417496 IGKV1-39P01597 117 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 IGKV1D-39P04432 117 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 ZNF429Q86V71 674 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 KDF1Q8NAX2 398 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-208ENST00000417496 KIAA1456Q9P272 454 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 ANKRD30BLA7E2S9 258 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 KIAA1324LA8MWY0 1029 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-208ENST00000417496 SS18L1O75177 396 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-208ENST00000417496 CLN5O75503 358 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 SCAF4O95104 1147 aaKnown RBP12.31□□□□□ -0.44
HDAC9-208ENST00000417496 IGLV2-14P01704 120 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 UBE2KP61086 200 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 DLK1P80370 383 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 PLGLB1Q02325 96 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 PLP2Q04941 152 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 PEAR1Q5VY43 1037 aaPredicted RBP12.31□□□□□ -0.44
HDAC9-208ENST00000417496 SLC25A24Q6NUK1 477 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 FAM180AQ6UWF9 173 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 HEPN1Q6WQI6 88 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 OR1K1Q8NGR3 316 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 YPEL4Q96NS1 127 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 ATP5SQ99766 215 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 CACNG5Q9UF02 275 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 WSB1Q9Y6I7 421 aa12.31□□□□□ -0.44
HDAC9-208ENST00000417496 CACNA1DQ01668 2161 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 A0A1B0GW64 132 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 SIRPB1O00241 398 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 YIF1AO95070 293 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 S100A9P06702 114 aaKnown RBP12.3□□□□□ -0.44
HDAC9-208ENST00000417496 CXCL1P09341 107 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 METTL15P1P0C7V9 234 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 RPL23AP62750 156 aaKnown RBP12.3□□□□□ -0.44
HDAC9-208ENST00000417496 ARL16Q0P5N6 197 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 SRSF7Q16629 238 aaKnown RBP eCLIP12.3□□□□□ -0.44
HDAC9-208ENST00000417496 MUCL1Q96DR8 90 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 GNPNAT1Q96EK6 184 aaPredicted RBP12.3□□□□□ -0.44
HDAC9-208ENST00000417496 GNG13Q9P2W3 67 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 METTL1Q9UBP6 276 aaKnown RBP12.3□□□□□ -0.44
HDAC9-208ENST00000417496 B4GALT7Q9UBV7 327 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 BOD1L1Q8NFC6 3051 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 DEGS1O15121 323 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 CNOT4O95628 575 aaKnown RBP12.3□□□□□ -0.44
HDAC9-208ENST00000417496 MT-CO3P00414 261 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 CTXN2P0C2S0 81 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 FGF8P55075 233 aaPredicted RBP12.3□□□□□ -0.44
HDAC9-208ENST00000417496 TLE1Q04724 770 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 SP5Q6BEB4 398 aaPredicted RBP12.3□□□□□ -0.44
HDAC9-208ENST00000417496 FAM53AQ6NSI3 398 aaPredicted RBP12.3□□□□□ -0.44
HDAC9-208ENST00000417496 H1FOOQ8IZA3 346 aaPredicted RBP12.3□□□□□ -0.44
HDAC9-208ENST00000417496 CLDND2Q8NHS1 167 aa12.3□□□□□ -0.44
HDAC9-208ENST00000417496 RBM7Q9Y580 266 aaKnown RBP12.3□□□□□ -0.44
HDAC9-208ENST00000417496 GTF3C1Q12789 2109 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 WDR1O75083 606 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 IL18BPO95998 194 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 ACP1P24666 158 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 ERVFRD-1P60508 538 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 ERVS71-1P61550 626 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 GNG3P63215 75 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 BAXQ07812 192 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 LCN15Q6UWW0 184 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 STX12Q86Y82 276 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 C1orf210Q8IVY1 113 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 Q8WTZ3 238 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 SEBOXQ9HB31 216 aaPredicted RBP12.29□□□□□ -0.44
HDAC9-208ENST00000417496 GSN-AS1Q9NRJ2 163 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 PRR14LQ5THK1 2151 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 TGIF2-C20orf24A0A0A6YYL0 155 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 ZFP92A6NM28 416 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 AP4M1O00189 453 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 FABP1P07148 127 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 CELA3BP08861 270 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 APLNRP35414 380 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 ARR3P36575 388 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 TAS2R30P59541 319 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 HLA-DRB3P79483 266 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 CLN3Q13286 438 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 TESK1Q15569 626 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 DCAF10Q5QP82 559 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 WDR86Q86TI4 376 aa12.29□□□□□ -0.44
HDAC9-208ENST00000417496 ZNF573Q86YE8 665 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms