RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 SPACA1Q9HBV2 294 aa11.34□□□□□ -0.59
PAF1-202ENST00000416728 CKLFQ9UBR5 152 aa11.34□□□□□ -0.59
PAF1-202ENST00000416728 A0A1W2PP11 408 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 SPINT2O43291 252 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 TXNL1O43396 289 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 RAMP3O60896 148 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 ELANEP08246 267 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 FOXE3Q13461 319 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 GPR176Q14439 515 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 DEFB136Q30KP8 78 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 Q3ZCU0 254 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 FAM53AQ6NSI3 398 aaPredicted RBP11.33□□□□□ -0.6
PAF1-202ENST00000416728 LCNL1Q6ZST4 164 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 OR5M8Q8NGP6 311 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 SMIM19Q96E16 107 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 S1PR3Q99500 378 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 RAB9BQ9NP90 201 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 BABAM2Q9NXR7 383 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 GNG12Q9UBI6 72 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 TRAPPC2LQ9UL33 140 aa11.33□□□□□ -0.6
PAF1-202ENST00000416728 SIRT4Q9Y6E7 314 aaPredicted RBP11.33□□□□□ -0.6
PAF1-202ENST00000416728 IRGMA1A4Y4 181 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 ZNF736B4DX44 427 aaPredicted RBP11.32□□□□□ -0.6
PAF1-202ENST00000416728 C12orf77C9JDV5 145 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 MCRIP1C9JLW8 97 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 OGG1O15527 345 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 WBP4O75554 376 aaKnown RBP11.32□□□□□ -0.6
PAF1-202ENST00000416728 VSIG8P0DPA2 414 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 MYL12AP19105 171 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 CDX1P47902 265 aaPredicted RBP11.32□□□□□ -0.6
PAF1-202ENST00000416728 LUMP51884 338 aaPredicted RBP11.32□□□□□ -0.6
PAF1-202ENST00000416728 KIR2DS1Q14954 304 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 TMEM30BQ3MIR4 351 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 SLC25A48Q6ZT89 311 aaKnown RBP11.32□□□□□ -0.6
PAF1-202ENST00000416728 PQLC1Q8N2U9 271 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 RNF152Q8N8N0 203 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 ZNF555Q8NEP9 628 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 OR13C5Q8NGS8 318 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 PLSCR3Q9NRY6 295 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 ETAA1Q9NY74 926 aa11.32□□□□□ -0.6
PAF1-202ENST00000416728 KMT2CQ8NEZ4 4911 aaKnown RBP11.31□□□□□ -0.6
PAF1-202ENST00000416728 MAGEA13PA6NCF6 341 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 SLC31A2O15432 143 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 IGFBP3P17936 291 aaPredicted RBP11.31□□□□□ -0.6
PAF1-202ENST00000416728 VDAC1P21796 283 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 SOX6P35712 828 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 ZNF137PP52743 207 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 C6orf183Q5T699 404 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 SYT6Q5T7P8 510 aaPredicted RBP11.31□□□□□ -0.6
PAF1-202ENST00000416728 C9orf66Q5T8R8 295 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 PRR18Q8N4B5 295 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 ZNF439Q8NDP4 499 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 OR10V1Q8NGI7 309 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 GHSRQ92847 366 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 MRPS24Q96EL2 167 aaKnown RBP11.31□□□□□ -0.6
PAF1-202ENST00000416728 HSPB9Q9BQS6 159 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 S100A14Q9HCY8 104 aa11.31□□□□□ -0.6
PAF1-202ENST00000416728 RCC2Q9P258 522 aaKnown RBP11.31□□□□□ -0.6
PAF1-202ENST00000416728 MRPS28Q9Y2Q9 187 aaKnown RBP11.31□□□□□ -0.6
PAF1-202ENST00000416728 TRBV5-5A0A0J9YX44 114 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 GPX5O75715 221 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 LALBAP00709 142 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 IGHG4P01861 327 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 HBZP02008 142 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 NHLRC4P0CG21 123 aaPredicted RBP11.3□□□□□ -0.6
PAF1-202ENST00000416728 OR5H8P0DN80 308 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 CFHR3Q02985 330 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 Q499Y3 187 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 YIF1BQ5BJH7 314 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 CT45A1Q5HYN5 189 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 DMKNQ6E0U4 476 aaPredicted RBP11.3□□□□□ -0.6
PAF1-202ENST00000416728 RAB12Q6IQ22 244 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 TRAT1Q6PIZ9 186 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 GLIPR1L1Q6UWM5 242 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 JAGN1Q8N5M9 183 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 FAM71E2Q8N5Q1 922 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 OR4K15Q8NH41 348 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 CT45A3Q8NHU0 189 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 C4orf3Q8WVX3 66 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 MUL1Q969V5 352 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 CHCHD3Q9NX63 227 aaKnown RBP11.3□□□□□ -0.6
PAF1-202ENST00000416728 SMPD3Q9NY59 655 aaPredicted RBP11.3□□□□□ -0.6
PAF1-202ENST00000416728 DIMT1Q9UNQ2 313 aaKnown RBP11.3□□□□□ -0.6
PAF1-202ENST00000416728 EXOSC1Q9Y3B2 195 aaKnown RBP11.3□□□□□ -0.6
PAF1-202ENST00000416728 NBEAL2Q6ZNJ1 2754 aa11.3□□□□□ -0.6
PAF1-202ENST00000416728 TRAV8-7A0A075B6U6 113 aa11.29□□□□□ -0.6
PAF1-202ENST00000416728 SEC14L6B5MCN3 397 aa11.29□□□□□ -0.6
PAF1-202ENST00000416728 FSTP19883 344 aa11.29□□□□□ -0.6
PAF1-202ENST00000416728 ZNF134P52741 427 aa11.29□□□□□ -0.6
PAF1-202ENST00000416728 F2RL1P55085 397 aa11.29□□□□□ -0.6
PAF1-202ENST00000416728 MED21Q13503 144 aa11.29□□□□□ -0.6
PAF1-202ENST00000416728 AWAT2Q6E213 333 aa11.29□□□□□ -0.6
PAF1-202ENST00000416728 OR1L1Q8NH94 360 aa11.29□□□□□ -0.6
PAF1-202ENST00000416728 RDH12Q96NR8 316 aa11.29□□□□□ -0.6
PAF1-202ENST00000416728 CLEC2DQ9UHP7 191 aa11.29□□□□□ -0.6
PAF1-202ENST00000416728 ZNF107Q9UII5 783 aaPredicted RBP11.29□□□□□ -0.6
PAF1-202ENST00000416728 PEX16Q9Y5Y5 336 aa11.29□□□□□ -0.6
PAF1-202ENST00000416728 LANCL1O43813 399 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 CA11O75493 328 aa11.28□□□□□ -0.6
PAF1-202ENST00000416728 IGF1P05019 195 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms