RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 OR6C3Q9NZP0 311 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 SIT1Q9Y3P8 196 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 TRAPPC1Q9Y5R8 145 aa12.68□□□□□ -0.38
NCKIPSD-204ENST00000416649 A0A0U1RQK1 487 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 ZNF320A2RRD8 509 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 GCH1P30793 250 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 EXT1Q16394 746 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 FAM78BQ5VT40 261 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 FAM69BQ5VUD6 431 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 ZCCHC14Q8WYQ9 949 aaKnown RBP12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 LHX4Q969G2 390 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 ZNF845Q96IR2 970 aaPredicted RBP12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 TMEM222Q9H0R3 208 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 C11orf1Q9H5F2 150 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 MSL2Q9HCI7 577 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 SERINC1Q9NRX5 453 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 CPAMD8Q8IZJ3 1885 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 IFNA1P01562 189 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 PTTG1IPP53801 180 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 LPAL2Q16609 132 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 DPPA3Q6W0C5 159 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 D2HGDHQ8N465 521 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 CPEB3Q8NE35 698 aaKnown RBP12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 OR2V1Q8NHB1 315 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 ADIPOR1Q96A54 375 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 PYGO2Q9BRQ0 406 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 DCHS1Q96JQ0 3298 aa12.67□□□□□ -0.38
NCKIPSD-204ENST00000416649 C20orf202A1L168 122 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 TMEM150CB9EJG8 249 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 PPYP01298 95 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 IL6RP08887 468 aaPredicted RBP12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 CAPZBP47756 277 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 ARL4DP49703 201 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 CYP2G1PQ6ZSU1 146 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 MRGPRGQ86SM5 289 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 C9orf40Q8IXQ3 194 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 C22orf15Q8WYQ4 148 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 VAMP8Q9BV40 100 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 IAPPP10997 89 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 SPINK2P20155 84 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 IL24Q13007 206 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 SAPCD1Q5SSQ6 148 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 COL5A1-AS1Q5SY13 56 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 OR4F5Q8NH21 305 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 SSC4DQ8WTU2 575 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 MOB3AQ96BX8 217 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 OR4F4Q96R69 305 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 PARLQ9H300 379 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 ZNF442Q9H7R0 627 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 AHCTF1Q8WYP5 2266 aa12.66□□□□□ -0.38
NCKIPSD-204ENST00000416649 ADAMTS9Q9P2N4 1935 aa12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 LILRA1O75019 489 aa12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 BAXQ07812 192 aa12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 MMDQ15546 238 aa12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 SELENOHQ8IZQ5 122 aaKnown RBP12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 SLC39A9Q9NUM3 307 aa12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 ESPL1Q14674 2120 aa12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 TRAV1-1A0A0B4J248 108 aa12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 MEF2BQ02080 365 aaPredicted RBP12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 SLC25A45Q8N413 288 aa12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 MRGPRX4Q96LA9 322 aa12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 MANBALQ9NQG1 85 aa12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 KLHL13Q9P2N7 655 aa12.65□□□□□ -0.38
NCKIPSD-204ENST00000416649 KBTBD11O94819 623 aa12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 UMODP07911 640 aa12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 BMP5P22003 454 aa12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 MDH2P40926 338 aaKnown RBP12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 NUFIP2Q7Z417 695 aaKnown RBP12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 SPEM1Q8N4L4 309 aa12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 CMTM2Q8TAZ6 248 aa12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 PLPPR1Q8TBJ4 325 aa12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 GATAD1Q8WUU5 269 aa12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 P2RX4Q99571 388 aa12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 GPR27Q9NS67 375 aa12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 SLC7A10Q9NS82 523 aa12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 ZFP30Q9Y2G7 519 aa12.65□□□□□ -0.39
NCKIPSD-204ENST00000416649 DOCK7Q96N67 2140 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 PIAS2O75928 621 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 IGHG1P01857 330 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 CDKN1AP38936 164 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 NXPH1P58417 271 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 MYBPHQ13203 477 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 TCF23Q7RTU1 214 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 OR2AE1Q8NHA4 323 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 MRPL30Q8TCC3 161 aaKnown RBP12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 TMEM234Q8WY98 164 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 CIB3Q96Q77 187 aaPredicted RBP12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 WNT16Q9UBV4 365 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 ZNF407Q9C0G0 2248 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 TRAV34A0A0B4J273 112 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 A0A1W2PNR3 127 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 DHRS3O75911 302 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 GYPAP02724 150 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 TMEM183BQ1AE95 376 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 FBXW9Q5XUX1 488 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 Q6ZVH6 145 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 GAPTQ8N292 157 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 CISD2Q8N5K1 135 aaKnown RBP12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 HSPB9Q9BQS6 159 aa12.64□□□□□ -0.39
NCKIPSD-204ENST00000416649 OR51B6Q9H340 312 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms