RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 TMEM33P57088 247 aa14.99□□□□□ -0.01
PHRF1-202ENST00000413872 TMEM30BQ3MIR4 351 aa14.99□□□□□ -0.01
PHRF1-202ENST00000413872 SPINK9Q5DT21 86 aa14.99□□□□□ -0.01
PHRF1-202ENST00000413872 ATP1A1-AS1Q5TC04 95 aa14.99□□□□□ -0.01
PHRF1-202ENST00000413872 SAXO1Q8IYX7 474 aa14.99□□□□□ -0.01
PHRF1-202ENST00000413872 MPV17P39210 176 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 GNG4P50150 75 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 KCNMB1Q16558 191 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 PDPNQ86YL7 162 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 APCDD1LQ8NCL9 501 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 TMEM45BQ96B21 275 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 CHST1O43916 411 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 UBE2L3P68036 154 aaKnown RBP14.98□□□□□ -0.01
PHRF1-202ENST00000413872 SIGLECL1Q8N7X8 197 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 OR1L1Q8NH94 360 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 CCL13Q99616 98 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 YTHDF2Q9Y5A9 579 aaKnown RBP14.98□□□□□ -0.01
PHRF1-202ENST00000413872 HPRT1P00492 218 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 C10orf128Q5T292 105 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 TIMP4Q99727 224 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 POMT1Q9Y6A1 747 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 FCGR3AP08637 254 aa14.98□□□□□ -0.01
PHRF1-202ENST00000413872 KLF9Q13886 244 aaPredicted RBP14.98□□□□□ -0.01
PHRF1-202ENST00000413872 MYPOPQ86VE0 399 aaPredicted RBP14.98□□□□□ -0.01
PHRF1-202ENST00000413872 NTF3P20783 257 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 TMEM241Q24JQ0 296 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 NHLRC2Q8NBF2 726 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 MANBALQ9NQG1 85 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 ZNF737O75373 536 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 RPS4XP62701 263 aaKnown RBP14.97□□□□□ -0.01
PHRF1-202ENST00000413872 ZXDCQ2QGD7 858 aaPredicted RBP14.97□□□□□ -0.01
PHRF1-202ENST00000413872 ZNF66Q6ZN08 573 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 CLCF1Q9UBD9 225 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 LHFPL6Q9Y693 200 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 C1QCP02747 245 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 NPY1RP25929 384 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 VAX1Q5SQQ9 334 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 Q6ZT83 130 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 OR1B1Q8NGR6 318 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 MS4A3Q96HJ5 214 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 PIMREGQ9BSJ6 248 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 SLC25A22Q9H936 323 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 TNFRSF19Q9NS68 423 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 SVILO95425 2214 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 SYNGR3O43761 229 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 GYPAP02724 150 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 SULT1A1P50225 295 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 PLAC9Q5JTB6 97 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 MRGPRFQ96AM1 343 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 SRXN1Q9BYN0 137 aa14.97□□□□□ -0.01
PHRF1-202ENST00000413872 ZNF703Q9H7S9 590 aaPredicted RBP14.97□□□□□ -0.01
PHRF1-202ENST00000413872 DYNLT3P51808 116 aa14.96□□□□□ -0.01
PHRF1-202ENST00000413872 ALX4Q9H161 411 aaPredicted RBP14.96□□□□□ -0.01
PHRF1-202ENST00000413872 C1orf100Q5SVJ3 147 aa14.96□□□□□ -0.01
PHRF1-202ENST00000413872 DOK5Q9P104 306 aa14.96□□□□□ -0.01
PHRF1-202ENST00000413872 MIOXQ9UGB7 285 aa14.96□□□□□ -0.01
PHRF1-202ENST00000413872 IGKV1D-42A0A075B6H8 117 aa14.96□□□□□ -0.01
PHRF1-202ENST00000413872 PPP1CCP36873 323 aaKnown RBP14.96□□□□□ -0.01
PHRF1-202ENST00000413872 PAFAH1B2P68402 229 aa14.96□□□□□ -0.01
PHRF1-202ENST00000413872 C11orf91Q3C1V1 193 aa14.96□□□□□ -0.01
PHRF1-202ENST00000413872 SPNS3Q6ZMD2 512 aa14.96□□□□□ -0.01
PHRF1-202ENST00000413872 MRGPRGQ86SM5 289 aa14.96□□□□□ -0.01
PHRF1-202ENST00000413872 BLNKQ8WV28 456 aa14.96□□□□□ -0.01
PHRF1-202ENST00000413872 SFTA3P0C7M3 94 aa14.96□□□□□ -0.02
PHRF1-202ENST00000413872 ZNF488Q96MN9 340 aa14.96□□□□□ -0.02
PHRF1-202ENST00000413872 SLC35B3Q9H1N7 401 aa14.96□□□□□ -0.02
PHRF1-202ENST00000413872 GHITMQ9H3K2 345 aa14.96□□□□□ -0.02
PHRF1-202ENST00000413872 LPAR2Q9HBW0 351 aa14.96□□□□□ -0.02
PHRF1-202ENST00000413872 RAB5AP20339 215 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 DEFA6Q01524 100 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 POM121Q96HA1 1249 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 CHCHD2Q9Y6H1 151 aaPredicted RBP14.95□□□□□ -0.02
PHRF1-202ENST00000413872 TMEM229AB2RXF0 380 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 ATP6V1G2-DDX39BF2Z307 99 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 J3QR06 171 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 FAM106CPP0CH98 169 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 TMEM54Q969K7 222 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 PERPQ96FX8 193 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 B9A039 149 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 GATCO43716 136 aaKnown RBP14.95□□□□□ -0.02
PHRF1-202ENST00000413872 AANATQ16613 207 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 ZNF561Q8N587 486 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 TMEM18Q96B42 140 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 SLC31A2O15432 143 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 ARG1P05089 322 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 TIMM23BQ5SRD1 257 aa14.95□□□□□ -0.02
PHRF1-202ENST00000413872 MRPL22Q9NWU5 206 aaKnown RBP14.95□□□□□ -0.02
PHRF1-202ENST00000413872 TOX4O94842 621 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 OR2H2O95918 312 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 MRPL24Q96A35 216 aaKnown RBP14.94□□□□□ -0.02
PHRF1-202ENST00000413872 HBZP02008 142 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 FA2HQ7L5A8 372 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 SSX7Q7RTT5 188 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 KLF14Q8TD94 323 aaPredicted RBP14.94□□□□□ -0.02
PHRF1-202ENST00000413872 ASCL3Q9NQ33 180 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 SIRT4Q9Y6E7 314 aaPredicted RBP14.94□□□□□ -0.02
PHRF1-202ENST00000413872 ASXL3Q9C0F0 2248 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 TRAV39A0A0B4J263 110 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 CLDN34H7C241 214 aa14.94□□□□□ -0.02
PHRF1-202ENST00000413872 EFNB2P52799 333 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms