RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 CCDC107Q8WV48 283 aa13.9□□□□□ -0.18
HSPG2-204ENST00000412328 CREB3L1Q96BA8 519 aa13.9□□□□□ -0.18
HSPG2-204ENST00000412328 SULT4A1Q9BR01 284 aa13.9□□□□□ -0.18
HSPG2-204ENST00000412328 LIN7BQ9HAP6 207 aa13.9□□□□□ -0.18
HSPG2-204ENST00000412328 GFOD1Q9NXC2 390 aa13.9□□□□□ -0.18
HSPG2-204ENST00000412328 PEX16Q9Y5Y5 336 aa13.9□□□□□ -0.18
HSPG2-204ENST00000412328 PLXNB1O43157 2135 aa13.9□□□□□ -0.18
HSPG2-204ENST00000412328 A0A1W2PPE3 182 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 MCRIP1C9JLW8 97 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 TOR1AO14656 332 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 MRPS14O60783 128 aaKnown RBP13.89□□□□□ -0.19
HSPG2-204ENST00000412328 TSPAN15O95858 294 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 BPNT1O95861 308 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 RCC1P18754 421 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-204ENST00000412328 GZMHP20718 246 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 CEACAM3P40198 252 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 PRRX1P54821 245 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 BLCAPP62952 87 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 RBM39Q14498 530 aaKnown RBP13.89□□□□□ -0.19
HSPG2-204ENST00000412328 TMEM95Q3KNT9 176 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 SYT6Q5T7P8 510 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-204ENST00000412328 UBE2UQ5VVX9 321 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 OR2T6Q8NHC8 308 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 NEK7Q8TDX7 302 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 ARL11Q969Q4 196 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 ST6GALNAC6Q969X2 333 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 TMEM59Q9BXS4 323 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 LPAR5Q9H1C0 372 aa13.89□□□□□ -0.19
HSPG2-204ENST00000412328 AMMECR1Q9Y4X0 333 aaPredicted RBP13.89□□□□□ -0.19
HSPG2-204ENST00000412328 NOTCH1P46531 2555 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 DNAH3Q8TD57 4116 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 IGHV3-43A0A0B4J1X8 118 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 SDCBPO00560 298 aaPredicted RBP13.88□□□□□ -0.19
HSPG2-204ENST00000412328 LDLRAD4O15165 306 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 SLC31A2O15432 143 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 ARL6IP5O75915 188 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 IGHV3-43DP0DP04 118 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 CALRP27797 417 aaKnown RBP13.88□□□□□ -0.19
HSPG2-204ENST00000412328 ZNF816Q0VGE8 651 aaPredicted RBP13.88□□□□□ -0.19
HSPG2-204ENST00000412328 HERPUD1Q15011 391 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 Q3ZCU0 254 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 C16orf82Q7Z2V1 217 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 C5orf24Q7Z6I8 188 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 SPARTQ8N0X7 666 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 OR1L1Q8NH94 360 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 TOMM40LQ969M1 308 aa13.88□□□□□ -0.19
HSPG2-204ENST00000412328 AK6Q9Y3D8 172 aaKnown RBP13.88□□□□□ -0.19
HSPG2-204ENST00000412328 UBE2QL1A1L167 161 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 TIMM23O14925 209 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 OR2F2O95006 317 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 NAPSAO96009 420 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 HBZP02008 142 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 ZNF137PP52743 207 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 MADCAM1Q13477 382 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 P2RY14Q15391 338 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 CCDC144NLQ6NUI1 221 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 OR2W3Q7Z3T1 314 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 C6orf201Q7Z4U5 140 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 NR2C2APQ86WQ0 139 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 FAM89BQ8N5H3 189 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 KCNG3Q8TAE7 436 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 RBM14Q96PK6 669 aaKnown RBP13.87□□□□□ -0.19
HSPG2-204ENST00000412328 OCSTAMPQ9BR26 566 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 SLC25A33Q9BSK2 321 aa13.87□□□□□ -0.19
HSPG2-204ENST00000412328 PRKDCP78527 4128 aaKnown RBP13.87□□□□□ -0.19
HSPG2-204ENST00000412328 HSD17B6O14756 317 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 BRS3P32247 399 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 ZNF134P52741 427 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 PLA2G7Q13093 441 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 HMGN3Q15651 99 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 TMEM30BQ3MIR4 351 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 NKAPLQ5M9Q1 402 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 C6orf183Q5T699 404 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 ZNF880Q6PDB4 577 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 TRAT1Q6PIZ9 186 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 SLC25A48Q6ZT89 311 aaKnown RBP13.86□□□□□ -0.19
HSPG2-204ENST00000412328 ZNF554Q86TJ5 538 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 OR56B4Q8NH76 319 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 RPEQ96AT9 228 aa13.86□□□□□ -0.19
HSPG2-204ENST00000412328 RRP15Q9Y3B9 282 aaKnown RBP13.86□□□□□ -0.19
HSPG2-204ENST00000412328 ADARB2-AS1A8MUL3 147 aa13.85□□□□□ -0.19
HSPG2-204ENST00000412328 M0QZ24 198 aa13.85□□□□□ -0.19
HSPG2-204ENST00000412328 SNRNP70P08621 437 aaKnown RBP13.85□□□□□ -0.19
HSPG2-204ENST00000412328 RAB7AP51149 207 aa13.85□□□□□ -0.19
HSPG2-204ENST00000412328 CLDN12P56749 244 aa13.85□□□□□ -0.19
HSPG2-204ENST00000412328 GNMTQ14749 295 aa13.85□□□□□ -0.19
HSPG2-204ENST00000412328 THNSL2Q86YJ6 484 aa13.85□□□□□ -0.19
HSPG2-204ENST00000412328 OR8H3Q8N146 312 aa13.85□□□□□ -0.19
HSPG2-204ENST00000412328 SVOPQ8N4V2 548 aa13.85□□□□□ -0.19
HSPG2-204ENST00000412328 DRAM1Q8N682 238 aa13.85□□□□□ -0.19
HSPG2-204ENST00000412328 Q8N6K4 173 aa13.85□□□□□ -0.19
HSPG2-204ENST00000412328 PRSS22Q9GZN4 317 aa13.85□□□□□ -0.19
HSPG2-204ENST00000412328 TRAPPC2LQ9UL33 140 aa13.85□□□□□ -0.19
HSPG2-204ENST00000412328 TRAV1-2A0A0B4J238 106 aa13.84□□□□□ -0.19
HSPG2-204ENST00000412328 TRDV1A0A1B0GX56 115 aa13.84□□□□□ -0.19
HSPG2-204ENST00000412328 SOCS1O15524 211 aa13.84□□□□□ -0.19
HSPG2-204ENST00000412328 GALP22466 123 aa13.84□□□□□ -0.19
HSPG2-204ENST00000412328 MNDAP41218 407 aa13.84□□□□□ -0.19
HSPG2-204ENST00000412328 ARHGDIBP52566 201 aa13.84□□□□□ -0.19
HSPG2-204ENST00000412328 OR10A3P58181 314 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms