RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 HLA-DRB3P79483 266 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 GUCA2AQ02747 115 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 ZNF79Q15937 498 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 TMEM30BQ3MIR4 351 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 DCAF12L2Q5VW00 463 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 FAHD2BQ6P2I3 314 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 C1orf122Q6ZSJ8 110 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 TCF23Q7RTU1 214 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 HOGA1Q86XE5 327 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 Q8N402 240 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 MFSD4AQ8N468 514 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 BEST4Q8NFU0 473 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 OR52I2Q8NH67 350 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 ARL11Q969Q4 196 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 FAHD2AQ96GK7 314 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 MDFIQ99750 246 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 TAF9BQ9HBM6 251 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 CALYQ9NYX4 217 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 ONECUT1Q9UBC0 465 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 MTFP1Q9UDX5 166 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 ZNF230Q9UIE0 474 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 INSIG2Q9Y5U4 225 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 KPTNQ9Y664 436 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 MEIS3P1A6NDR6 274 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 C12orf77C9JDV5 145 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 IFNA2P01563 188 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 CGB3P0DN86 165 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 CGB7P0DN87 165 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 CCL3L1P16619 93 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 SRD5A1P18405 259 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 RCVRNP35243 200 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 DGCR2P98153 550 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 LSAMPQ13449 338 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 ZNF846Q147U1 533 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 HMGN3Q15651 99 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 METTL11BQ5VVY1 283 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 HEPN1Q6WQI6 88 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 IL17RELQ6ZVW7 336 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 OR10A7Q8NGE5 316 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 GALMQ96C23 342 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 SRRQ9GZT4 340 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 LINC00574Q9H8X3 128 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 MMP26Q9NRE1 261 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 TAS2R8Q9NYW2 309 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 ANAPC10Q9UM13 185 aa13.57□□□□□ -0.24
TSPAN4-208ENST00000409531 MEX3AA1L020 520 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 C17orf98A8MV24 154 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 NPIPB11E5RHQ5 1161 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 C15orf65H3BRN8 121 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 DIRAS3O95661 229 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 NAT1P18440 290 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 CD40LGP29965 261 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 SSTR5P35346 364 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 DLX6P56179 175 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 ARF6P62330 175 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 RNASE12Q5GAN4 147 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 Q6ZPA2 131 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 PRR18Q8N4B5 295 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 GVQW1Q8N7I0 195 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 OR4A4PQ8NGN8 299 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 MAFIPQ8WZ33 124 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 TSC22D3Q99576 134 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 METTL8Q9H825 291 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 KLK11Q9UBX7 282 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 ZNF107Q9UII5 783 aaPredicted RBP13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 ANXA10Q9UJ72 324 aa13.56□□□□□ -0.24
TSPAN4-208ENST00000409531 J3QLI3 93 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 FABP7O15540 132 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 HBZP02008 142 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 CTXN2P0C2S0 81 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 GSTT2BP0CG30 244 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 PPP5CP53041 499 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 TAS2R46P59540 309 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 ARPC4P59998 168 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 ERVFRD-1P60508 538 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 PAX8Q06710 450 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 C17orf58Q2M2W7 97 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 STEAP3Q658P3 488 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 OR52W1Q6IF63 320 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 THAP7Q9BT49 309 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 IDI2-AS1Q9NZ38 188 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 RBMX2Q9Y388 322 aaKnown RBP13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 SVEP1Q4LDE5 3571 aa13.55□□□□□ -0.24
TSPAN4-208ENST00000409531 F2RL2O00254 374 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 CSF1P09603 554 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 IGHV1-8P0DP01 117 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 FPR2P25090 351 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 SRP14P37108 136 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 AP3S2P59780 193 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 HTD2P86397 168 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 ACTBL2Q562R1 376 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 TRIQKQ629K1 86 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 OR5AP2Q8NGF4 316 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 OR52M1Q8NGK5 317 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 RFESDQ8TAC1 157 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 IL1F10Q8WWZ1 152 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 KIRREL1Q96J84 757 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 CCDC32Q9BV29 185 aa13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 UNKLQ9H9P5 680 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-208ENST00000409531 SESN1Q9Y6P5 492 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms