RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 ST6GALNAC5Q9BVH7 336 aa16.82■□□□□ 0.28
VSX1-203ENST00000409285 UNKLQ9H9P5 680 aaKnown RBP16.82■□□□□ 0.28
VSX1-203ENST00000409285 KLK11Q9UBX7 282 aa16.82■□□□□ 0.28
VSX1-203ENST00000409285 CSPG4Q6UVK1 2322 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 hCG_1809904A0A1W2PP81 198 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 A0A1W2PPE2 198 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 A0A1W2PR64 198 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 A0A1W2PRV1 198 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 MEIS3P1A6NDR6 274 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 FABP7O15540 132 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 SPINT2O43291 252 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 HTD2P86397 168 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 PAX8Q06710 450 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 CYB5R2Q6BCY4 276 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 ARL11Q969Q4 196 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 CABLES2Q9BTV7 478 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 CCDC32Q9BV29 185 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 TAS2R8Q9NYW2 309 aa16.81■□□□□ 0.28
VSX1-203ENST00000409285 IGKV1D-8A0A087WSZ0 117 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 MEX3AA1L020 520 aaKnown RBP16.8■□□□□ 0.28
VSX1-203ENST00000409285 HBZP02008 142 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 CD99P14209 185 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 TBPP20226 339 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 OR52M1Q8NGK5 317 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 MAFIPQ8WZ33 124 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 GALMQ96C23 342 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 C18orf12Q96KH6 178 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 THAP7Q9BT49 309 aaPredicted RBP16.8■□□□□ 0.28
VSX1-203ENST00000409285 TMUB1Q9BVT8 246 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 SIRPDQ9H106 197 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 METTL8Q9H825 291 aaKnown RBP16.8■□□□□ 0.28
VSX1-203ENST00000409285 HIF1ANQ9NWT6 349 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 ONECUT1Q9UBC0 465 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 TEP1Q99973 2627 aaKnown RBP16.8■□□□□ 0.28
VSX1-203ENST00000409285 J3QLI3 93 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 J3QRK9 145 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 MMP9P14780 707 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 FPR2P25090 351 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 GDNFP39905 211 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 TAS2R46P59540 309 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 DCAF12L2Q5VW00 463 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 STEAP3Q658P3 488 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 Q8N7P7 452 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 OR5AP2Q8NGF4 316 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 DEDD2Q8WXF8 326 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 KIRREL1Q96J84 757 aa16.8■□□□□ 0.28
VSX1-203ENST00000409285 A0A087X0M5 115 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 A0A1B0GX30 115 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 TGFAP01135 160 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 CSF1P09603 554 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 SCTP09683 121 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 CTXN2P0C2S0 81 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 GSTT2P0CG29 244 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 GSTT2BP0CG30 244 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 IGHV1-8P0DP01 117 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 FOSL1P15407 271 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 LOXL3P58215 753 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 HERPUD1Q15011 391 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 RNASE12Q5GAN4 147 aaKnown RBP16.79■□□□□ 0.28
VSX1-203ENST00000409285 METTL11BQ5VVY1 283 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 OR52W1Q6IF63 320 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 LYSMD2Q8IV50 215 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 TMEM229BQ8NBD8 167 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 OR1L1Q8NH94 360 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 IDI2-AS1Q9NZ38 188 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 JPT1Q9UK76 154 aa16.79■□□□□ 0.28
VSX1-203ENST00000409285 IGKV1-6A0A0C4DH72 117 aa16.78■□□□□ 0.28
VSX1-203ENST00000409285 SMAD7O15105 426 aaKnown RBP16.78■□□□□ 0.28
VSX1-203ENST00000409285 LANCL1O43813 399 aa16.78■□□□□ 0.28
VSX1-203ENST00000409285 ZNF16P17020 682 aaPredicted RBP16.78■□□□□ 0.28
VSX1-203ENST00000409285 PRTN3P24158 256 aa16.78■□□□□ 0.28
VSX1-203ENST00000409285 TAS2R19P59542 299 aa16.78■□□□□ 0.28
VSX1-203ENST00000409285 ARF6P62330 175 aa16.78■□□□□ 0.28
VSX1-203ENST00000409285 KRTAP1-1Q07627 177 aa16.78■□□□□ 0.28
VSX1-203ENST00000409285 BAK1Q16611 211 aa16.78■□□□□ 0.28
VSX1-203ENST00000409285 Q3ZCU0 254 aa16.78■□□□□ 0.28
VSX1-203ENST00000409285 ACTBL2Q562R1 376 aa16.78■□□□□ 0.28
VSX1-203ENST00000409285 LY6G6FQ5SQ64 297 aa16.78■□□□□ 0.28
VSX1-203ENST00000409285 TOLLIPQ9H0E2 274 aa16.78■□□□□ 0.28
VSX1-203ENST00000409285 SESN1Q9Y6P5 492 aa16.78■□□□□ 0.28
VSX1-203ENST00000409285 TRBV6-7A0A0A0MS04 114 aa16.77■□□□□ 0.28
VSX1-203ENST00000409285 ANKRD20A5PA0PJZ0 165 aa16.77■□□□□ 0.28
VSX1-203ENST00000409285 ZNF736B4DX44 427 aaPredicted RBP16.77■□□□□ 0.28
VSX1-203ENST00000409285 CD74P04233 296 aa16.77■□□□□ 0.28
VSX1-203ENST00000409285 IL7P13232 177 aa16.77■□□□□ 0.28
VSX1-203ENST00000409285 ERVFRD-1P60508 538 aa16.77■□□□□ 0.28
VSX1-203ENST00000409285 CHRFAM7AQ494W8 412 aa16.77■□□□□ 0.28
VSX1-203ENST00000409285 PRAMEF5Q5TYX0 476 aa16.77■□□□□ 0.28
VSX1-203ENST00000409285 PRR18Q8N4B5 295 aa16.77■□□□□ 0.28
VSX1-203ENST00000409285 MXRA5Q9NR99 2828 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 CD5LO43866 347 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 MMP23AO75900 390 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 OMGP23515 440 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 ZBTB25P24278 435 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 CD34P28906 385 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 AP3S2P59780 193 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 ARPC4P59998 168 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 VAX1Q5SQQ9 334 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 RFESDQ8TAC1 157 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 IL1F10Q8WWZ1 152 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms