RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 NEU4Q8WWR8 484 aaPredicted RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 NRGNQ92686 78 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 GALMQ96C23 342 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 TIMD4Q96H15 378 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 MED30Q96HR3 178 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 CCL19Q99731 98 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 MED28Q9H204 178 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 C5orf66Q9H5L9 145 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 PLEKHF2Q9H8W4 249 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 OR2S2Q9NQN1 319 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 C14orf166Q9Y224 244 aaKnown RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 FBN2P35556 2912 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 DVL1O14640 695 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 SPINT2O43291 252 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 NDUFB3O43676 98 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 CREBL2O60519 120 aaPredicted RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 CCNKO75909 580 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 OR4E1P0C645 316 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 FPR2P25090 351 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 RAG2P55895 527 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 CD83Q01151 205 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 TLE4Q04727 773 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 PHLDA2Q53GA4 152 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 LRRC10Q5BKY1 277 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 C6orf183Q5T699 404 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 METTL11BQ5VVY1 283 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 ZNF660Q6AZW8 331 aaPredicted RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 ZNF880Q6PDB4 577 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 DHRS11Q6UWP2 260 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 GLDNQ6ZMI3 551 aaPredicted RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 Q6ZS49 121 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 AKAP14Q86UN6 197 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 LHFPL1Q86WI0 220 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 GAPTQ8N292 157 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 OR52L2PQ8NGH6 319 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 NINJ1Q92982 152 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 SCGB3A2Q96PL1 93 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 GPN1Q9HCN4 374 aaPredicted RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 MBNL3Q9NUK0 354 aaKnown RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 MGAT4AQ9UM21 535 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 PCDHB10Q9UN67 800 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 GPR132Q9UNW8 380 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 CREBBPQ92793 2442 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 TRGV10A0A0A0MS01 117 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 CEACAM18A8MTB9 384 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 HSD17B6O14756 317 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 PRAF2O60831 178 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 RP2O75695 350 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 OR8U9P0C7N5 309 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 RPS2P15880 293 aaKnown RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 ZBTB25P24278 435 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 PPP1CCP36873 323 aaKnown RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 RPL31P62899 125 aaKnown RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 PPP1R1AQ13522 171 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 FCN2Q15485 313 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 SRSF7Q16629 238 aaKnown RBP eCLIP3.08□□□□□ -1.92
RTN4-208ENST00000404909 LIN54Q6MZP7 749 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 MUC20Q8N307 709 aaPredicted RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 ZNF525Q8N782 197 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 ZDHHC22Q8N966 263 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 OR8U1Q8NH10 309 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 RAB1CQ92928 201 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 GPHA2Q96T91 129 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 RTBDNQ9BSG5 229 aaPredicted RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 PARP12Q9H0J9 701 aaKnown RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 GHITMQ9H3K2 345 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 CHODLQ9H9P2 273 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 RDH8Q9NYR8 311 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 OR6C3Q9NZP0 311 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 GNG12Q9UBI6 72 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 CTSZQ9UBR2 303 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 RNF150Q9ULK6 438 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 ARHGAP32A7KAX9 2087 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 TRBV6-7A0A0A0MS04 114 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 IGKV1D-13A0A0B4J2D9 117 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 TEX13DA0A0J9YY54 714 aaPredicted RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 C7orf66A4D0T2 115 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 TNFSF12O43508 249 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 F12P00748 615 aaPredicted RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 HNRNPCP07910 306 aaKnown RBP eCLIP3.08□□□□□ -1.92
RTN4-208ENST00000404909 IGKV1-13P0DP09 117 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 GZMHP20718 246 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 NFYBP25208 207 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 EFNA4P52798 201 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 PIGPP57054 158 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 ERVFRD-1P60508 538 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 RRAS2P62070 204 aaPredicted RBP3.08□□□□□ -1.92
RTN4-208ENST00000404909 DHRS2Q13268 280 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 GNMTQ14749 295 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 SLC9A3R2Q15599 337 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 HMGN3Q15651 99 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 C11orf88Q6PI97 169 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 KCTD9Q7L273 389 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 SLC25A42Q86VD7 318 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 FAM185AQ8N0U4 392 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 MOB3AQ96BX8 217 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 C14orf79Q96F83 325 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 DMRTB1Q96MA1 342 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 NEURL2Q9BR09 285 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 SLC5A7Q9GZV3 580 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms