RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CTAG1AP78358 180 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 FLI1Q01543 452 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 MGAT3Q09327 533 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 SMAGPQ0VAQ4 97 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 MLLT11Q13015 90 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 ENDOGQ14249 297 aaKnown RBP1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 PAFAH1B3Q15102 231 aaKnown RBP1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 IGFBP7Q16270 282 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 C4orf26Q17RF5 130 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 GOLGA7BQ2TAP0 167 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 KRTAP25-1Q3LHN0 102 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 SPNS3Q6ZMD2 512 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 CLEC20AQ6ZU45 233 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 FAM19A3Q7Z5A8 133 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 Q8N402 240 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 SLC25A45Q8N413 288 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 ERMNQ8TAM6 284 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 MBOAT7Q96N66 472 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 OLFM3Q96PB7 478 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 DHRS9Q9BPW9 319 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 EBPLQ9BY08 206 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 CHST5Q9GZS9 411 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 SLC22A4Q9H015 551 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 POMPQ9Y244 141 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 TP53TG1Q9Y2A0 90 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 TBL2Q9Y4P3 447 aaKnown RBP1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 SNX10Q9Y5X0 201 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 NOS1P29475 1434 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 MIA3Q5JRA6 1907 aa1.97□□□□□ -2.09
HMGB1P17-201ENST00000403495 MYO15BQ96JP2 1530 aa1.96□□□□□ -2.09
HMGB1P17-201ENST00000403495 PLB1Q6P1J6 1458 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 IGHV3-43A0A0B4J1X8 118 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 F5H5T6 163 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 H3BQ85 93 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 K7ERS5 55 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 AZIN1O14977 448 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 EPPINO95925 133 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 TYMSP04818 313 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 C8orf88P0DMB2 117 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 GTF2F2P13984 249 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 CD99P14209 185 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 GABRA1P14867 456 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 NQO1P15559 274 aaKnown RBP1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 CFL1P23528 166 aaKnown RBP1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 CD34P28906 385 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 IFNGR2P38484 337 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 CDKN2CP42773 168 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 HAAOP46952 286 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 HSPA13P48723 471 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 ZNF83P51522 516 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 CEBPGP53567 150 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 C1QTNF8P60827 252 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 GTF2BQ00403 316 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 DEFB134Q4QY38 66 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 CST9Q5W186 159 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 WDR59Q6PJI9 974 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 CYHR1Q6ZMK1 362 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 FAM19A5Q7Z5A7 132 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 MTERF4Q7Z6M4 381 aaKnown RBP1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 CALHM3Q86XJ0 350 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 ZIC4Q8N9L1 334 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 PIGXQ8TBF5 258 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 PPCDCQ96CD2 204 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 PRSS27Q9BQR3 290 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 ZNF391Q9UJN7 358 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 RIMS2Q9UQ26 1411 aa1.96□□□□□ -2.1
HMGB1P17-201ENST00000403495 CACNA1DQ01668 2161 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 IGHV3-21A0A0B4J1V1 117 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 GOLGA6L19H0YKK7 550 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 CXCR6O00574 342 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 TCF21O43680 179 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 IFNA5P01569 189 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 SERPINA6P08185 405 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 NEFHP12036 1026 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 COL8A2P25067 703 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 NKX2-5P52952 324 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 AP2S1P53680 142 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 FADDQ13158 208 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 SKP2Q13309 424 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 UAP1Q16222 522 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 IMPG1Q17R60 797 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 LRRC26Q2I0M4 334 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 SPIN3Q5JUX0 258 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 MRPL2Q5T653 305 aaKnown RBP1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 CPNE9Q8IYJ1 553 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR11L1Q8NGX0 322 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 CYGBQ8WWM9 190 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 PTH2Q96A98 100 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 CLDN23Q96B33 292 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 CHMP6Q96FZ7 201 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 MRPS26Q9BYN8 205 aaKnown RBP1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 MS4A6AQ9H2W1 248 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 LRRC19Q9H756 370 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 PSTPIP2Q9H939 334 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 HRASLSQ9HDD0 168 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 ASF1BQ9NVP2 202 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 BABAM2Q9NXR7 383 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 C3orf18Q9UK00 162 aa1.95□□□□□ -2.1
HMGB1P17-201ENST00000403495 C9orf84Q5VXU9 1444 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms