RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 EDARADDQ8WWZ3 215 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 TOMM40LQ969M1 308 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 CPNE2Q96FN4 548 aaPredicted RBP9.75□□□□□ -0.85
SKA3-203ENST00000400018 KIRREL1Q96J84 757 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 ZNF436Q9C0F3 470 aaPredicted RBP9.75□□□□□ -0.85
SKA3-203ENST00000400018 BIN3Q9NQY0 253 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 IL36GQ9NZH8 169 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 MEIKINA0A087WXM9 373 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 PHF1O43189 567 aaPredicted RBP9.75□□□□□ -0.85
SKA3-203ENST00000400018 GSTZ1O43708 216 aaPredicted RBP9.75□□□□□ -0.85
SKA3-203ENST00000400018 RLN2P04090 185 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 NMBP08949 121 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 OR3A1P47881 315 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 FGL1Q08830 312 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 RBMS2Q15434 407 aaKnown RBP9.75□□□□□ -0.85
SKA3-203ENST00000400018 TMEM88Q6PEY1 159 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 OR10V1Q8NGI7 309 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 OR13A1Q8NGR1 328 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 MRPL30Q8TCC3 161 aaKnown RBP9.75□□□□□ -0.85
SKA3-203ENST00000400018 SFT2D1Q8WV19 159 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 CMTM3Q96MX0 182 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 TLNRD1Q9H1K6 362 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 HES4Q9HCC6 221 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 CTSZQ9UBR2 303 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 PFDN2Q9UHV9 154 aa9.75□□□□□ -0.85
SKA3-203ENST00000400018 CTDSPLO15194 276 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 LHBP01229 141 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 ZNF735P0CB33 412 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 RD3LP0DJH9 198 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 TNFSF4P23510 183 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 SCAND1P57086 179 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 TSPAN5P62079 268 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 GNMTQ14749 295 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 ALKAL2Q6UX46 152 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 RBMS3Q6XE24 437 aaKnown RBP9.74□□□□□ -0.85
SKA3-203ENST00000400018 LDLRAD3Q86YD5 345 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 ZNF295-AS1Q8N0V1 137 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 UXS1Q8NBZ7 420 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 ADAD2Q8NCV1 583 aaKnown RBP9.74□□□□□ -0.85
SKA3-203ENST00000400018 OR1L1Q8NH94 360 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 MARCH1Q8TCQ1 289 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 GINS4Q9BRT9 223 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 ZDHHC8Q9ULC8 765 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 SONP18583 2426 aaKnown RBP9.74□□□□□ -0.85
SKA3-203ENST00000400018 TMEM178BH3BS89 294 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 SH2D1BO14796 132 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 MMP23AO75900 390 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 TCRBP04435 133 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 MELTFP08582 738 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 FGF2P09038 288 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 NDUFB7P17568 137 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 SLC6A1P30531 599 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 GLP1RP43220 463 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 PLA1AQ53H76 456 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 C11orf71Q6IPW1 123 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 ZFP82Q8N141 532 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 OR13C8Q8NGS7 320 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 LPAR2Q9HBW0 351 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 MIOXQ9UGB7 285 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 TRAPPC2LQ9UL33 140 aa9.74□□□□□ -0.85
SKA3-203ENST00000400018 A0A1B0GWJ7 208 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 OPCMLQ14982 345 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 ZNF146Q15072 292 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 DNM1P46Q6ZS02 220 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 PDZD9Q8IXQ8 264 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 PERPQ96FX8 193 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 ZNF251Q9BRH9 671 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 MS4A5Q9H3V2 200 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 RNF150Q9ULK6 438 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 AKAP9Q99996 3911 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 OR5H14A6NHG9 310 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 J3QKU1 62 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 PPIHO43447 177 aaKnown RBP9.73□□□□□ -0.85
SKA3-203ENST00000400018 TNFSF12O43508 249 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 SIX6O95475 246 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 GSTP1P09211 210 aaKnown RBP9.73□□□□□ -0.85
SKA3-203ENST00000400018 RPS2P15880 293 aaKnown RBP9.73□□□□□ -0.85
SKA3-203ENST00000400018 SMIM21Q3B7S5 101 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 RNASE10Q5GAN6 216 aaKnown RBP9.73□□□□□ -0.85
SKA3-203ENST00000400018 KRBOX4Q5JUW0 171 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 SAXO1Q8IYX7 474 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 Q8NFD4 153 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 OR11L1Q8NGX0 322 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 H1FXQ92522 213 aaKnown RBP9.73□□□□□ -0.85
SKA3-203ENST00000400018 PLEKHF2Q9H8W4 249 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 CBLN4Q9NTU7 201 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 VSIG4Q9Y279 399 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 ABCA2Q9BZC7 2435 aa9.73□□□□□ -0.85
SKA3-203ENST00000400018 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.72□□□□□ -0.858e-11■■■□□ 18.8
SKA3-203ENST00000400018 ABCA1O95477 2261 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 ADAM20O43506 726 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 AKAIN1P0CW23 69 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 IRF2P14316 349 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 CCL3L1P16619 93 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 TLE4Q04727 773 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 CHRFAM7AQ494W8 412 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 OR52L2PQ8NGH6 319 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 OR2T35Q8NGX2 323 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 FAM222BQ8WU58 562 aa9.72□□□□□ -0.85
SKA3-203ENST00000400018 MRPS24Q96EL2 167 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms