RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 YTHDF2Q9Y5A9 579 aaKnown RBP9.86□□□□□ -0.83
TTC28-201ENST00000397906 NTNG2Q96CW9 530 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 DAOP14920 347 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 RFLNBQ8N5W9 214 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 RNF133Q8WVZ7 376 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 PDLIM4P50479 330 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 HCP5Q6MZN7 132 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 Q6ZNX1 250 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 ADAD2Q8NCV1 583 aaKnown RBP9.86□□□□□ -0.83
TTC28-201ENST00000397906 OIT3Q8WWZ8 545 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 TECRQ9NZ01 308 aaKnown RBP9.86□□□□□ -0.83
TTC28-201ENST00000397906 HPXP02790 462 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 TMEM97Q5BJF2 176 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 C10orf35Q96D05 121 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 FAM162BQ5T6X4 162 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 CENPVQ7Z7K6 275 aaPredicted RBP9.86□□□□□ -0.83
TTC28-201ENST00000397906 ZNF519Q8TB69 540 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 FGF9P31371 208 aaPredicted RBP9.86□□□□□ -0.83
TTC28-201ENST00000397906 TMEM229AB2RXF0 380 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 TMEM33P57088 247 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 C16orf92Q96LL3 132 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 GABRA6Q16445 453 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 SLC2A9Q9NRM0 540 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 PDCD11Q14690 1871 aaKnown RBP9.86□□□□□ -0.83
TTC28-201ENST00000397906 KIF13BQ9NQT8 1826 aa9.86□□□□□ -0.83
TTC28-201ENST00000397906 GZMKP49863 264 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 NIT2Q9NQR4 276 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 IGKV3D-11A0A0A0MRZ8 115 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 MPC2O95563 127 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 C1QAP02745 245 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 IGKV3-11P04433 115 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 IL13RA2Q14627 380 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 SRXN1Q9BYN0 137 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 TM4SF20Q53R12 229 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 DNASE2BQ8WZ79 361 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 MRPL37Q9BZE1 423 aaKnown RBP9.85□□□□□ -0.83
TTC28-201ENST00000397906 FBXL17Q9UF56 701 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 RPL36A-HNRNPH2H7BZ11 118 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 NPY1RP25929 384 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 TMEM241Q24JQ0 296 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 ZNF680Q8NEM1 530 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 AP5S1Q9NUS5 200 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 HLA-GP17693 338 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 COL8A1P27658 744 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 PRNTQ86SH4 94 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 MUC15Q8N387 334 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 BVESQ8NE79 360 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 WNT2BQ93097 391 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 WSB1Q9Y6I7 421 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 A0A1W2PRX2 142 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 ERVS71-1P61550 626 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 OR2H2O95918 312 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 P01737 135 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 GAPDHP04406 335 aaKnown RBP9.85□□□□□ -0.83
TTC28-201ENST00000397906 SPCS3P61009 180 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 CEACAM21Q3KPI0 293 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 OR4B1Q8NGF8 309 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 SCN2AQ99250 2005 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 PILRAQ9UKJ1 303 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 CDRT15L2A8MXV6 281 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 HBZP02008 142 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 TLNRD1Q9H1K6 362 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 LOC105371242A0A075B767 164 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 PPIAL4CA0A0B4J2A2 164 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 ANKRD20A5PA0PJZ0 165 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 TMEM127O75204 238 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 PPIAL4GP0DN37 164 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 TMEM18Q96B42 140 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 ZNF426Q9BUY5 554 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 GHITMQ9H3K2 345 aa9.85□□□□□ -0.83
TTC28-201ENST00000397906 IGHV1-69-2A0A0G2JMI3 117 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 PGA4P0DJD7 388 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 HIST1H1EP10412 219 aaKnown RBP9.84□□□□□ -0.83
TTC28-201ENST00000397906 RBM11P57052 281 aaKnown RBP9.84□□□□□ -0.83
TTC28-201ENST00000397906 DMKNQ6E0U4 476 aaPredicted RBP9.84□□□□□ -0.83
TTC28-201ENST00000397906 CLEC18BQ6UXF7 455 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 PGLYRP3Q96LB9 341 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 RTN4RQ9BZR6 473 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 CEACAM1P13688 526 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 EBLN2Q6P2I7 272 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 RPS4Y2Q8TD47 263 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 ABHD1Q96SE0 405 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 ICMTO60725 284 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 FAM157CP0CG43 387 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 IGSF11Q5DX21 431 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 UNQ5815/PRO19632Q6UWF5 114 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 STXBP6Q8NFX7 210 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 SIGLEC12Q96PQ1 595 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 ZDHHC8Q9ULC8 765 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 C11orf94C9JXX5 98 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 REG1AP05451 166 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 HMGA2P52926 109 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 LCN2P80188 198 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 DCAF12L2Q5VW00 463 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 LYZL2Q7Z4W2 148 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 TCTE3Q8IZS6 198 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 TMEM105Q8N8V8 129 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 SBF2Q86WG5 1849 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 UNC13CQ8NB66 2214 aa9.84□□□□□ -0.83
TTC28-201ENST00000397906 OR1L8Q8NGR8 309 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 246.3 ms