RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 ARHGAP5-AS1Q96IT6 56 aa14.38□□□□□ -0.11
TNFSF13-204ENST00000396542 PECRQ9BY49 303 aa14.38□□□□□ -0.11
TNFSF13-204ENST00000396542 VPREB3Q9UKI3 123 aa14.38□□□□□ -0.11
TNFSF13-204ENST00000396542 TRBV6-6A0A0A6YYG2 114 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 LY6LH3BQJ8 138 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 J3QR06 171 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 RAB27BO00194 218 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 TOR1AO14656 332 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 TMEM127O75204 238 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 TFAP2AP05549 437 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 ALDH3B2P48448 385 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 PRRX1P54821 245 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 SCAND1P57086 179 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 RPL15P61313 204 aaKnown RBP14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 SSX2Q16385 188 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 LTC4SQ16873 150 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 MOGAT2Q3SYC2 334 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 UBALD1Q8TB05 177 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 PIFOQ8TCI5 191 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 LEAP2Q969E1 77 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 SSX3Q99909 188 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 RIMS4Q9H426 269 aaPredicted RBP14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 TAF9BQ9HBM6 251 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 RAB9BQ9NP90 201 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 TNFRSF19Q9NS68 423 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 GFOD1Q9NXC2 390 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 DPM3Q9P2X0 92 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 AK3Q9UIJ7 227 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 PSG11Q9UQ72 335 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 DNHD1Q96M86 4753 aa14.37□□□□□ -0.11
TNFSF13-204ENST00000396542 TMEM89A2RUT3 159 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 METTL21EPA6NDL7 271 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 FAM181BA6NEQ2 426 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 POM121CA8CG34 1229 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 BUB1B-PAK6H3BSN5 160 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 H3BUX3 64 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 SDCBPO00560 298 aaPredicted RBP14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 SPINT2O43291 252 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 HBZP02008 142 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 HKR1P10072 659 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 SNRPBP14678 240 aaKnown RBP14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 DYNLT3P51808 116 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 LSM3P62310 102 aaKnown RBP14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 Q3ZCU0 254 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 C8orf31Q8N9H6 132 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 OR10R2Q8NGX6 335 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 OR1L1Q8NH94 360 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 SPATA3Q8NHX4 192 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 NDNFQ8TB73 568 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 LGALS14Q8TCE9 139 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 CREB3L1Q96BA8 519 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 RAB3CQ96E17 227 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 MMP28Q9H239 520 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 KCNK7Q9Y2U2 307 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 TENM1Q9UKZ4 2725 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 STAB1Q9NY15 2570 aa14.36□□□□□ -0.11
TNFSF13-204ENST00000396542 BTBD17A6NE02 478 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 LEUTXA8MZ59 168 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 MFNGO00587 321 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 GPR137BO60478 399 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 RPS19P39019 145 aaKnown RBP14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 COMPP49747 757 aaPredicted RBP14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 ACTG1P63261 375 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 HMGN3Q15651 99 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 OLFML2AQ68BL7 652 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 MOB1BQ7L9L4 216 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 CROCCP3Q8IVE0 287 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 HDHD3Q9BSH5 251 aaPredicted RBP14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 C12orf4Q9NQ89 552 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 KCNIP1Q9NZI2 227 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 HILPDAQ9Y5L2 63 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 ETV7Q9Y603 341 aa14.35□□□□□ -0.11
TNFSF13-204ENST00000396542 IGHV3-7P01780 117 aa14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 HIST1H1DP16402 221 aaKnown RBP14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 CEACAM3P40198 252 aa14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 NCS1P62166 190 aa14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 HTD2P86397 168 aa14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 IDNKQ5T6J7 187 aa14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 FAM53AQ6NSI3 398 aaPredicted RBP14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 ANKRD13BQ86YJ7 626 aa14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 LINC00311Q8N616 119 aa14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 ZNF439Q8NDP4 499 aa14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 ATG5Q9H1Y0 275 aa14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 CHMP1AQ9HD42 196 aaPredicted RBP14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 AMMECR1Q9Y4X0 333 aaPredicted RBP14.34□□□□□ -0.11
TNFSF13-204ENST00000396542 IGHV3-43A0A0B4J1X8 118 aa14.33□□□□□ -0.12
TNFSF13-204ENST00000396542 OOSP1A8MZH6 123 aa14.33□□□□□ -0.12
TNFSF13-204ENST00000396542 GABARAPO95166 117 aa14.33□□□□□ -0.12
TNFSF13-204ENST00000396542 IGHV3-43DP0DP04 118 aa14.33□□□□□ -0.12
TNFSF13-204ENST00000396542 GNG10P50151 68 aa14.33□□□□□ -0.12
TNFSF13-204ENST00000396542 CTF1Q16619 201 aa14.33□□□□□ -0.12
TNFSF13-204ENST00000396542 TPTE2P1Q5T6R2 138 aa14.33□□□□□ -0.12
TNFSF13-204ENST00000396542 C5orf24Q7Z6I8 188 aa14.33□□□□□ -0.12
TNFSF13-204ENST00000396542 PRR18Q8N4B5 295 aa14.33□□□□□ -0.12
TNFSF13-204ENST00000396542 OR5H6Q8NGV6 325 aa14.33□□□□□ -0.12
TNFSF13-204ENST00000396542 GCDHQ92947 438 aaPredicted RBP14.33□□□□□ -0.12
TNFSF13-204ENST00000396542 CMSS1Q9BQ75 279 aaKnown RBP14.33□□□□□ -0.12
TNFSF13-204ENST00000396542 SERPINE3A8MV23 424 aa14.32□□□□□ -0.12
TNFSF13-204ENST00000396542 SCGNO76038 276 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms