RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 SATL1Q86VE3 508 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 SBSPONQ8IVN8 264 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 PQLC1Q8N2U9 271 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 STX19Q8N4C7 294 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 TSEN15Q8WW01 171 aaKnown RBP13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 METTL9Q9H1A3 318 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 GHITMQ9H3K2 345 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 ZNF107Q9UII5 783 aaPredicted RBP13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 ORC6Q9Y5N6 252 aa13.64□□□□□ -0.23
EXOSC3-202ENST00000396521 I3L521 148 aa13.63□□□□□ -0.23
EXOSC3-202ENST00000396521 SPINT2O43291 252 aa13.63□□□□□ -0.23
EXOSC3-202ENST00000396521 HTR3BO95264 441 aa13.63□□□□□ -0.23
EXOSC3-202ENST00000396521 RCN1Q15293 331 aa13.63□□□□□ -0.23
EXOSC3-202ENST00000396521 SLC25A48Q6ZT89 311 aaKnown RBP13.63□□□□□ -0.23
EXOSC3-202ENST00000396521 ZNF491Q8N8L2 437 aa13.63□□□□□ -0.23
EXOSC3-202ENST00000396521 OR52N1Q8NH53 320 aa13.63□□□□□ -0.23
EXOSC3-202ENST00000396521 S100A13Q99584 98 aa13.63□□□□□ -0.23
EXOSC3-202ENST00000396521 FAM192AQ9GZU8 254 aa13.63□□□□□ -0.23
EXOSC3-202ENST00000396521 OR51J1Q9H342 316 aa13.63□□□□□ -0.23
EXOSC3-202ENST00000396521 SPACA1Q9HBV2 294 aa13.63□□□□□ -0.23
EXOSC3-202ENST00000396521 LCE6AA0A183 80 aa13.62□□□□□ -0.23
EXOSC3-202ENST00000396521 FADS2O95864 444 aaKnown RBP13.62□□□□□ -0.23
EXOSC3-202ENST00000396521 PPIFP30405 207 aaKnown RBP13.62□□□□□ -0.23
EXOSC3-202ENST00000396521 GBX2P52951 348 aaPredicted RBP13.62□□□□□ -0.23
EXOSC3-202ENST00000396521 RBM11P57052 281 aaKnown RBP13.62□□□□□ -0.23
EXOSC3-202ENST00000396521 CITED4Q96RK1 184 aa13.62□□□□□ -0.23
EXOSC3-202ENST00000396521 HSPB9Q9BQS6 159 aa13.62□□□□□ -0.23
EXOSC3-202ENST00000396521 ALG8Q9BVK2 526 aa13.62□□□□□ -0.23
EXOSC3-202ENST00000396521 ERGIC3Q9Y282 383 aa13.62□□□□□ -0.23
EXOSC3-202ENST00000396521 OVOL1O14753 267 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 LANCL1O43813 399 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 IGLV1-40P01703 118 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 MT-ND4P03905 459 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 F2RL1P55085 397 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 GPR176Q14439 515 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 C6orf183Q5T699 404 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 LPCAT4Q643R3 524 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 TRAT1Q6PIZ9 186 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 ZNF497Q6ZNH5 498 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 OR6Q1Q8NGQ2 317 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 OR10K1Q8NGX5 313 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 C9orf16Q9BUW7 83 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 ISYNA1Q9NPH2 558 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 TMEM138Q9NPI0 162 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 GNG12Q9UBI6 72 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 GMPPBQ9Y5P6 360 aa13.61□□□□□ -0.23
EXOSC3-202ENST00000396521 TRAV39A0A0B4J263 110 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 FAM90A10PA6NDY2 464 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 EI24O14681 340 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 ARPC1BO15143 372 aaKnown RBP13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 CA11O75493 328 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 HLA-DRB1P01911 266 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 GTF2F2P13984 249 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 VHLP40337 213 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 RAB9AP51151 201 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 PPP3R1P63098 170 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 KIAA0141Q14154 515 aaPredicted RBP13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 MMDQ15546 238 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 LHFPL3Q86UP9 236 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 OR51A2Q8NGJ7 313 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 GPR148Q8TDV2 347 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 NEK7Q8TDX7 302 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 LGALS12Q96DT0 336 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 MRPS24Q96EL2 167 aaKnown RBP13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 Q96MT0 163 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 PDCD1LG2Q9BQ51 273 aa13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 MRPS28Q9Y2Q9 187 aaKnown RBP13.6□□□□□ -0.23
EXOSC3-202ENST00000396521 ZNF736B4DX44 427 aaPredicted RBP13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 AIPO00170 330 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 GEMIN2O14893 280 aaKnown RBP13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 SAP30O75446 220 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 FRMD6-AS1P0C7T7 363 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 ZNF93P35789 620 aaPredicted RBP13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 CCDC58Q4VC31 144 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 ATAD3CQ5T2N8 411 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 ZNF554Q86TJ5 538 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 CBR4Q8N4T8 237 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 ZNF439Q8NDP4 499 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 CCDC107Q8WV48 283 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 KLK15Q9H2R5 256 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 GNB4Q9HAV0 340 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 TRAPPC2LQ9UL33 140 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 ING4Q9UNL4 249 aa13.59□□□□□ -0.23
EXOSC3-202ENST00000396521 TRAV41A0A0B4J266 112 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 MCRIP1C9JLW8 97 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 CDRT1O95170 752 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 ALPLP05186 524 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 RAB40BQ12829 278 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 LSAMPQ13449 338 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 CT45A1Q5HYN5 189 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 ASPHD1Q5U4P2 390 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 TCTEX1D1Q8N7M0 179 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 CT45A3Q8NHU0 189 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 DCUN1D4Q92564 292 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 CST11Q9H112 138 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 ISG20L2Q9H9L3 353 aaKnown RBP13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 ERVK13-1Q9NX77 482 aa13.58□□□□□ -0.24
EXOSC3-202ENST00000396521 C12orf77C9JDV5 145 aa13.57□□□□□ -0.24
EXOSC3-202ENST00000396521 GLAP06280 429 aa13.57□□□□□ -0.24
EXOSC3-202ENST00000396521 OR8U9P0C7N5 309 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms