RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 TMEM80Q96HE8 168 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 ABCG5Q9H222 651 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 C8orf4Q9NR00 106 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 ERGIC3Q9Y282 383 aa12.95□□□□□ -0.34
DDR1-229ENST00000396342 MRPS28Q9Y2Q9 187 aaKnown RBP12.95□□□□□ -0.34
DDR1-229ENST00000396342 CCL24O00175 119 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 EBAG9O00559 213 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 RGS11O94810 467 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 MT-ND4P03905 459 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 ELANEP08246 267 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 MAPK3P27361 379 aaPredicted RBP12.94□□□□□ -0.34
DDR1-229ENST00000396342 ETV1P50549 477 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 EGFEM1PQ0D2K5 195 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 FOXE3Q13461 319 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 EBI3Q14213 229 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 AWAT2Q6E213 333 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 RAB12Q6IQ22 244 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 ZNF497Q6ZNH5 498 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 RTN4IP1Q8WWV3 396 aaPredicted RBP12.94□□□□□ -0.34
DDR1-229ENST00000396342 GHSRQ92847 366 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 DIMT1Q9UNQ2 313 aaKnown RBP12.94□□□□□ -0.34
DDR1-229ENST00000396342 PEX16Q9Y5Y5 336 aa12.94□□□□□ -0.34
DDR1-229ENST00000396342 CMYA5Q8N3K9 4069 aa12.93□□□□□ -0.34
DDR1-229ENST00000396342 WI2-2373I1.2A0A1W2PRP0 233 aa12.93□□□□□ -0.34
DDR1-229ENST00000396342 CRTAPO75718 401 aaPredicted RBP12.93□□□□□ -0.34
DDR1-229ENST00000396342 DIAPH2-AS1Q14236 149 aa12.93□□□□□ -0.34
DDR1-229ENST00000396342 SYT6Q5T7P8 510 aaPredicted RBP12.93□□□□□ -0.34
DDR1-229ENST00000396342 C9orf66Q5T8R8 295 aa12.93□□□□□ -0.34
DDR1-229ENST00000396342 OR2G6Q5TZ20 316 aa12.93□□□□□ -0.34
DDR1-229ENST00000396342 STEAP3Q658P3 488 aa12.93□□□□□ -0.34
DDR1-229ENST00000396342 GLIPR1L1Q6UWM5 242 aa12.93□□□□□ -0.34
DDR1-229ENST00000396342 CDH26Q8IXH8 852 aa12.93□□□□□ -0.34
DDR1-229ENST00000396342 S1PR3Q99500 378 aa12.93□□□□□ -0.34
DDR1-229ENST00000396342 SLC29A1Q99808 456 aa12.93□□□□□ -0.34
DDR1-229ENST00000396342 ABRACLQ9P1F3 81 aa12.93□□□□□ -0.34
DDR1-229ENST00000396342 LRRC42Q9Y546 428 aa12.93□□□□□ -0.34
DDR1-229ENST00000396342 IGHV3-43A0A0B4J1X8 118 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 FAM90A10PA6NDY2 464 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 EFCAB10A6NFE3 127 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 FAM90A7PA6NKC0 464 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 FAM90A23PA8MXZ1 464 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 MYL12BO14950 172 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 OGG1O15527 345 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 GLAP06280 429 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 NHLRC4P0CG21 123 aaPredicted RBP12.92□□□□□ -0.34
DDR1-229ENST00000396342 IGHV3-43DP0DP04 118 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 CAPGP40121 348 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 KRTAP10-11P60412 298 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 LCNL1Q6ZST4 164 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 NKAIN3Q8N8D7 197 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 UBALD1Q8TB05 177 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 RGP1Q92546 391 aaPredicted RBP12.92□□□□□ -0.34
DDR1-229ENST00000396342 MUL1Q969V5 352 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 NEDD4LQ96PU5 975 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 B9D2Q9BPU9 175 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 ZNF251Q9BRH9 671 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 CHCHD6Q9BRQ6 235 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 SELENOIQ9C0D9 397 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 CST11Q9H112 138 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 OR2S2Q9NQN1 319 aa12.92□□□□□ -0.34
DDR1-229ENST00000396342 PRKDCP78527 4128 aaKnown RBP12.91□□□□□ -0.34
DDR1-229ENST00000396342 C15orf65H3BRN8 121 aa12.91□□□□□ -0.34
DDR1-229ENST00000396342 FUT3P21217 361 aa12.91□□□□□ -0.34
DDR1-229ENST00000396342 CDX1P47902 265 aaPredicted RBP12.91□□□□□ -0.34
DDR1-229ENST00000396342 KIR2DS1Q14954 304 aa12.91□□□□□ -0.34
DDR1-229ENST00000396342 MMDQ15546 238 aa12.91□□□□□ -0.34
DDR1-229ENST00000396342 SMN1Q16637 294 aaKnown RBP12.91□□□□□ -0.34
DDR1-229ENST00000396342 UTF1Q5T230 341 aa12.91□□□□□ -0.34
DDR1-229ENST00000396342 SLC25A48Q6ZT89 311 aaKnown RBP12.91□□□□□ -0.34
DDR1-229ENST00000396342 OR10V1Q8NGI7 309 aa12.91□□□□□ -0.34
DDR1-229ENST00000396342 OR4K15Q8NH41 348 aa12.91□□□□□ -0.34
DDR1-229ENST00000396342 TFAP2CQ92754 450 aa12.91□□□□□ -0.34
DDR1-229ENST00000396342 DCLRE1BQ9H816 532 aa12.91□□□□□ -0.34
DDR1-229ENST00000396342 KIAA1456Q9P272 454 aa12.91□□□□□ -0.34
DDR1-229ENST00000396342 GHRLQ9UBU3 117 aa12.91□□□□□ -0.34
DDR1-229ENST00000396342 ZNF107Q9UII5 783 aaPredicted RBP12.91□□□□□ -0.34
DDR1-229ENST00000396342 GPX5O75715 221 aa12.9□□□□□ -0.34
DDR1-229ENST00000396342 HBZP02008 142 aa12.9□□□□□ -0.34
DDR1-229ENST00000396342 MAS1P04201 325 aa12.9□□□□□ -0.34
DDR1-229ENST00000396342 RPLP1P05386 114 aaKnown RBP12.9□□□□□ -0.34
DDR1-229ENST00000396342 FSTP19883 344 aa12.9□□□□□ -0.34
DDR1-229ENST00000396342 DOC2BQ14184 412 aa12.9□□□□□ -0.34
DDR1-229ENST00000396342 ZNF554Q86TJ5 538 aa12.9□□□□□ -0.34
DDR1-229ENST00000396342 DHRSXQ8N5I4 330 aa12.9□□□□□ -0.34
DDR1-229ENST00000396342 APH1BQ8WW43 257 aa12.9□□□□□ -0.34
DDR1-229ENST00000396342 WWC2-AS2Q96NR7 200 aa12.9□□□□□ -0.34
DDR1-229ENST00000396342 P2RX4Q99571 388 aa12.9□□□□□ -0.34
DDR1-229ENST00000396342 VCXQ9H320 206 aa12.9□□□□□ -0.34
DDR1-229ENST00000396342 STEAP1Q9UHE8 339 aa12.9□□□□□ -0.34
DDR1-229ENST00000396342 TRBV5-5A0A0J9YX44 114 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 SEC14L6B5MCN3 397 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 C12orf77C9JDV5 145 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 H0YHG0 523 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 LANCL1O43813 399 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 WBP4O75554 376 aaKnown RBP12.89□□□□□ -0.35
DDR1-229ENST00000396342 UBBP0CG47 229 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 MGMTP16455 207 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 ST3GAL4Q11206 333 aa12.89□□□□□ -0.35
DDR1-229ENST00000396342 DMKNQ6E0U4 476 aaPredicted RBP12.89□□□□□ -0.35
DDR1-229ENST00000396342 XAF1Q6GPH4 301 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms