RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 TP53RKQ96S44 253 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 NKX6-2Q9C056 277 aaPredicted RBP10.26□□□□□ -0.77
ITGB1-202ENST00000396033 TLNRD1Q9H1K6 362 aa10.26□□□□□ -0.77
ITGB1-202ENST00000396033 A8MXE2 369 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 SCGB1D2O95969 90 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 LYL1P12980 280 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 MSMPQ1L6U9 139 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 PCSK4Q6UW60 755 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 TBC1D26Q86UD7 250 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 LRTM2Q8N967 370 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 OR2Z1Q8NG97 314 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 CABLES2Q9BTV7 478 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 TRBV23-1A0A0A0MS06 115 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 MEX3AA1L020 520 aaKnown RBP10.25□□□□□ -0.77
ITGB1-202ENST00000396033 MZT1Q08AG7 82 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 VHLLQ6RSH7 139 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 ZNF600Q6ZNG1 722 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 LRP11Q86VZ4 500 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 C18orf12Q96KH6 178 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 TAAR3PQ9P1P4 343 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 PIEZO2Q9H5I5 2752 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 MEOX2P50222 304 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 AKR1D1P51857 326 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 SMCO1Q147U7 214 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 C3orf36Q3SXR2 165 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 CCL28Q9NRJ3 127 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 TUBD1Q9UJT1 453 aa10.25□□□□□ -0.77
ITGB1-202ENST00000396033 TRAV20A0A0B4J274 112 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 A0A0G2JNJ9 132 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 MSGN1A6NI15 193 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 SPP1P10451 314 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 RND3P61587 244 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 ACP7Q6ZNF0 438 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 CNTNAP3BQ96NU0 1288 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 CNTNAP3Q9BZ76 1288 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 PIGMQ9H3S5 423 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 OR1A1Q9P1Q5 309 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 Q9UFV3 132 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 LSM5Q9Y4Y9 91 aaKnown RBP10.24□□□□□ -0.77
ITGB1-202ENST00000396033 FAM87AP0C7U9 286 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 RAB13P51153 203 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 SRPXP78539 464 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 DEFA5Q01523 94 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 PRR30Q53SZ7 412 aaPredicted RBP10.24□□□□□ -0.77
ITGB1-202ENST00000396033 CMTM1Q8IZ96 169 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 H1FOOQ8IZA3 346 aaPredicted RBP10.24□□□□□ -0.77
ITGB1-202ENST00000396033 ZFP82Q8N141 532 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 UBE2J1Q9Y385 318 aaPredicted RBP10.24□□□□□ -0.77
ITGB1-202ENST00000396033 OR2W1Q9Y3N9 320 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 SMIM21Q3B7S5 101 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 TMEM268Q5VZI3 342 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 UBALD1Q8TB05 177 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 GPHA2Q96T91 129 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 TMEM222Q9H0R3 208 aa10.24□□□□□ -0.77
ITGB1-202ENST00000396033 PSPNO60542 156 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 GLRXP35754 106 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 KLF3P57682 345 aaPredicted RBP10.23□□□□□ -0.77
ITGB1-202ENST00000396033 SLC35G3Q8N808 338 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 SNRNP40Q96DI7 357 aaKnown RBP10.23□□□□□ -0.77
ITGB1-202ENST00000396033 AQP10Q96PS8 301 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 ARID1AO14497 2285 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 A0A1B0GWJ7 208 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 HSPA12AO43301 675 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 TMPRSS3P57727 454 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 SLC16A13Q7RTY0 426 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 MRGPRGQ86SM5 289 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 LRRC29Q8WV35 223 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 GSN-AS1Q9NRJ2 163 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 DNAJB11Q9UBS4 358 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 ERRFI1Q9UJM3 462 aaPredicted RBP10.23□□□□□ -0.77
ITGB1-202ENST00000396033 TMEM30CPA0ZSE6 113 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 TNFSF12O43508 249 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 DEDDO75618 318 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 PTBP3O95758 552 aaKnown RBP10.23□□□□□ -0.77
ITGB1-202ENST00000396033 CCKARP32238 428 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 NKX6-1P78426 367 aaPredicted RBP10.23□□□□□ -0.77
ITGB1-202ENST00000396033 ASF1BQ9NVP2 202 aa10.23□□□□□ -0.77
ITGB1-202ENST00000396033 NPIPB11E5RHQ5 1161 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 IGHV3-13P01766 116 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 TFF1P04155 84 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 S100GP29377 79 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 ZNF695Q8IW36 515 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 PDZD9Q8IXQ8 264 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 MBNL3Q9NUK0 354 aaKnown RBP10.22□□□□□ -0.77
ITGB1-202ENST00000396033 TMED3Q9Y3Q3 217 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 WIPI2Q9Y4P8 454 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 CD200P41217 278 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 RPS23P62266 143 aaKnown RBP10.22□□□□□ -0.77
ITGB1-202ENST00000396033 C22orf34Q6ZV56 151 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 OR10V1Q8NGI7 309 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 PHYHIPLQ96FC7 376 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 TAF9BQ9HBM6 251 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 ZGRF1Q86YA3 2104 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 CADP27708 2225 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 LMO1P25800 156 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 HMGN3Q15651 99 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 TMEM171Q8WVE6 324 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 SLC25A32Q9H2D1 315 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 KCNIP1Q9NZI2 227 aa10.22□□□□□ -0.77
ITGB1-202ENST00000396033 PFDN2Q9UHV9 154 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms