RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 MRPL49Q13405 166 aaKnown RBP11.84□□□□□ -0.51
SNCA-204ENST00000394989 KIR2DS1Q14954 304 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 ACSF3Q4G176 576 aaPredicted RBP11.84□□□□□ -0.51
SNCA-204ENST00000394989 MEX3BQ6ZN04 569 aaKnown RBP11.84□□□□□ -0.51
SNCA-204ENST00000394989 LGI3Q8N145 548 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 GAPTQ8N292 157 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 LILRB2Q8N423 598 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 PRSS33Q8NF86 280 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 OR1J1Q8NGS3 322 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 TMEM222Q9H0R3 208 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 ZDHHC8Q9ULC8 765 aa11.84□□□□□ -0.51
SNCA-204ENST00000394989 CARHSP1Q9Y2V2 147 aaKnown RBP11.84□□□□□ -0.51
SNCA-204ENST00000394989 RIF1Q5UIP0 2472 aaKnown RBP11.84□□□□□ -0.51
SNCA-204ENST00000394989 TRBV6-6A0A0A6YYG2 114 aa11.83□□□□□ -0.51
SNCA-204ENST00000394989 LRP5LA4QPB2 252 aa11.83□□□□□ -0.51
SNCA-204ENST00000394989 ZNF616Q08AN1 781 aa11.83□□□□□ -0.51
SNCA-204ENST00000394989 MST1LQ2TV78 715 aa11.83□□□□□ -0.51
SNCA-204ENST00000394989 MMP26Q9NRE1 261 aa11.83□□□□□ -0.51
SNCA-204ENST00000394989 PRR33A8MZF0 331 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 CDIPTO14735 213 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 TM4SF5O14894 197 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 SLC34A2O95436 690 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 CNOT4O95628 575 aaKnown RBP11.83□□□□□ -0.52
SNCA-204ENST00000394989 OR8U9P0C7N5 309 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 RAC2P15153 192 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 TMEM33P57088 247 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 CYB5R2Q6BCY4 276 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 OR8U1Q8NH10 309 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 KLF14Q8TD94 323 aaPredicted RBP11.83□□□□□ -0.52
SNCA-204ENST00000394989 ERGIC1Q969X5 290 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 SARAFQ96BY9 339 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 BSCL2Q96G97 398 aaPredicted RBP11.83□□□□□ -0.52
SNCA-204ENST00000394989 EIF5A2Q9GZV4 153 aaKnown RBP11.83□□□□□ -0.52
SNCA-204ENST00000394989 FBXL17Q9UF56 701 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 IQCF6A8MYZ5 107 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 TNFSF13O75888 250 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 IGHV2-70P01814 119 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 OR8U8P0C7N1 319 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 DEFA6Q01524 100 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 AWAT1Q58HT5 328 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 TMEM268Q5VZI3 342 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 S100PBPQ96BU1 408 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 BOD1Q96IK1 185 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 MEGF10Q96KG7 1140 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 CCL28Q9NRJ3 127 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 URGCP-MRPS24S4R325 110 aa11.83□□□□□ -0.52
SNCA-204ENST00000394989 RND3P61587 244 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 HOXA4Q00056 320 aaPredicted RBP11.82□□□□□ -0.52
SNCA-204ENST00000394989 SPIN3Q5JUX0 258 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 SEM1Q6ZVN7 128 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 CA5BP1Q8WTZ4 195 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 PRO1933Q9H354 126 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 RIMS4Q9H426 269 aaPredicted RBP11.82□□□□□ -0.52
SNCA-204ENST00000394989 TAF9BQ9HBM6 251 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 PLA2G2EQ9NZK7 142 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 INTS1Q8N201 2190 aaKnown RBP11.82□□□□□ -0.52
SNCA-204ENST00000394989 CXorf65A6NEN9 183 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 SLC33A1O00400 549 aaPredicted RBP11.82□□□□□ -0.52
SNCA-204ENST00000394989 TAAR5O14804 337 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 DEGS1O15121 323 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 FHITP49789 147 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 FAM185AQ8N0U4 392 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 OR4D5Q8NGN0 318 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 PLPPR1Q8TBJ4 325 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 TCTEX1D2Q8WW35 142 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 TMEM56Q96MV1 263 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 TMED3Q9Y3Q3 217 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 MMP24Q9Y5R2 645 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 TMEM56-RWDD3S4R434 201 aa11.82□□□□□ -0.52
SNCA-204ENST00000394989 TRAV39A0A0B4J263 110 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 ZNF891A8MT65 544 aaPredicted RBP11.81□□□□□ -0.52
SNCA-204ENST00000394989 HSD17B6O14756 317 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 MLNRO43193 412 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 OR2H2O95918 312 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 PGA5P0DJD9 388 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 RPS10P46783 165 aaKnown RBP11.81□□□□□ -0.52
SNCA-204ENST00000394989 NDUFA6P56556 154 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 ZNF324BQ6AW86 544 aaPredicted RBP11.81□□□□□ -0.52
SNCA-204ENST00000394989 Q6ZRG5 221 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 KIRREL1Q96J84 757 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 GGACTQ9BVM4 153 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 PLSCR4Q9NRQ2 329 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 LPAR3Q9UBY5 353 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 C7orf77A4D0Y5 90 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 SIRPB1O00241 398 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 CTXN2P0C2S0 81 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 OR13C7P0DN81 318 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 GPX4P36969 197 aaPredicted RBP11.81□□□□□ -0.52
SNCA-204ENST00000394989 RAB2AP61019 212 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 ZNF561Q8N587 486 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 DMBX1Q8NFW5 382 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 NKX2-6A6NCS4 301 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 E5RGE8 158 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 UBE2CO00762 179 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 C1QL1O75973 258 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 CGAP01215 116 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 HLA-DRB3P79483 266 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 CXorf67Q86X51 503 aaPredicted RBP11.81□□□□□ -0.52
SNCA-204ENST00000394989 ZNF565Q8N9K5 539 aa11.81□□□□□ -0.52
SNCA-204ENST00000394989 STARD4Q96DR4 205 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms